Gene Mchl_5378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5378 
Symbol 
ID7116295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5767281 
End bp5768150 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content66% 
IMG OID643528068 
ProductIntegrase catalytic region 
Protein accessionYP_002424064 
Protein GI218533248 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC TAGACGTCTC CGAGCGCCGC GCCTGTCGGG CGCTCGGGCA GCATCGCTCG 
ACGCAGCGCA AGGTGCCGCG GGGAAGAGAG GATGAGGCCG CGCTGACAGC CGACCTCGTG
GAACTGGCTC GCCAGTACGG GCGCTACGGC TACCGGAAGA TCGGTGCATT GCTGAAGGCG
GCGGGCTGGT TCGTCAACGA CAAGCGGGTC GAACGGATCT GGCGGCGCGA GGGGCTGAAG
GTCCCGTCTC GGCAGCCCAA GCGCGGCCGC ATCTGGGACG GGGATGGTTC CTGCCTGCGA
TTGCGGGCGG AGCGTCGCGA TCACGTCTGG TCCTACGACT TTGTCGAAGC CCGCACGCAC
GAGGGCCGCA AGTTCCGGAT GCTGAACGTG GTCGATGAGT TCACGCGGGA GTGCCTGGCG
ATCCGCGTCG CACGCAAGCT GAAGGCGGCG GACGTGATCG ACGTGCTGTC CGACCTGTTC
ATCCTGCGCG GCGTGCCCGG CCATATCCGC TCGGACAACG GTCCGGAGTT CATCGCCAAG
TCCGTGCAGG CCTGGATCAC CGGTGTCGGC GCCAGAACAG CCTACATCGC ACCCGGCTCG
CCATGGGAGA ACGGTTACGT CGAGAGCTTC AACGCACGAC TACGGGACGA GCTTTTGAAC
GGTGAGATCT TCTACACGCT CAAGGAGGCG CAGATCGTGA TCGAGAGTTG GCGTCTACAC
TACAACAGCG TGCGCCCGCA CGCCTCGCTC GGCTACCGAC CACCGGCCCC GGAGGTGTTC
GTGCCGGCCT TCACCGCTTG GCCGGCTGCG CTCACCCGGT CGGCTCCGCC GGCCAAGCGA
CCCGTGGAGC AAAGGCCGAC CCTGCACTAA
 
Protein sequence
MNVLDVSERR ACRALGQHRS TQRKVPRGRE DEAALTADLV ELARQYGRYG YRKIGALLKA 
AGWFVNDKRV ERIWRREGLK VPSRQPKRGR IWDGDGSCLR LRAERRDHVW SYDFVEARTH
EGRKFRMLNV VDEFTRECLA IRVARKLKAA DVIDVLSDLF ILRGVPGHIR SDNGPEFIAK
SVQAWITGVG ARTAYIAPGS PWENGYVESF NARLRDELLN GEIFYTLKEA QIVIESWRLH
YNSVRPHASL GYRPPAPEVF VPAFTAWPAA LTRSAPPAKR PVEQRPTLH