Gene Mchl_5339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5339 
Symbol 
ID7116256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5722425 
End bp5723294 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content72% 
IMG OID643528031 
Productinner-membrane translocator 
Protein accessionYP_002424027 
Protein GI218533211 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.13292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.967769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCA GCACCCTCGT CAGCGGGCTC GGCCTCGGCA GCATGTACGG GCTGGTGGCG 
CTCGGCTTCC ACATCACCTT CGCGGTCTCC GGCACGGTGA ACTTCGCGCA AGGCAGCGCC
GTCACCCTCG GGGCGGTGCT GGGCTACACC TTCGCGGTTC AGCTCGGCTG GCCGATGCCG
CTGGCGGTCG CCGCGTCTCT GGCCGGCTGT GCGCTCCTTG GGCTCGCCGT CGAGCGCCTG
CTGGTGCGCC CCTTCGTGGT GCGCGGCTCC GATGCATGGC TCCTAGCGAC GGTGGCCGGC
GGCATCATCC TCGACAACGT GCTGCTGTTC ACCTTCGGCA AGGAACCGCG CAGCCTGCCC
TCGGCGCTGG TCGCGGCGCC CGTGCAGGTT CTGGGGGCGG GCGTCTACCC GCTCCAGCTC
CTGATCCCGG TGGTCGGCAT CGCGGCGGCC GTGGCGATCC GCGCTGTGTT CCGCGGCACG
GAACTCGGCC GGGTGCTGCT GGCAGTGGCG CAGAATTCCG AAGCTGCACG GCTGATGGGC
ATCGACGTCG CCCGCACCGT GGCCTGCGCC TTTGCGCTCT CGGCCGTGCT CGCGGGCGCG
GCGGGCCTGC TCATCGCGCC GCTCTTCTCC GTCTCGGCCG AGATGGGCGC CCTGTTCGGG
ATCAAGGCCT TCGCGGTGGC GATCCTCGGC GGCATCGGCT CGGCCACCGG GGTGGTGCTG
GCGGGCCTTC TCTACGGCCT CGTCGAGGCC GGCGTCACTG CGACGCTGGG CTCCGGTGCG
ACCCAGATCG TCGTCTTCTC GGTCATCATC CTCGCGCTCG CGCTCCGCCC GAACGGCCTG
CTCGGCCGCG CCGCCGTCAA CAAGGTCTGA
 
Protein sequence
MLTSTLVSGL GLGSMYGLVA LGFHITFAVS GTVNFAQGSA VTLGAVLGYT FAVQLGWPMP 
LAVAASLAGC ALLGLAVERL LVRPFVVRGS DAWLLATVAG GIILDNVLLF TFGKEPRSLP
SALVAAPVQV LGAGVYPLQL LIPVVGIAAA VAIRAVFRGT ELGRVLLAVA QNSEAARLMG
IDVARTVACA FALSAVLAGA AGLLIAPLFS VSAEMGALFG IKAFAVAILG GIGSATGVVL
AGLLYGLVEA GVTATLGSGA TQIVVFSVII LALALRPNGL LGRAAVNKV