Gene Mchl_5319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5319 
Symbol 
ID7118421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5700531 
End bp5702783 
Gene Length2253 bp 
Protein Length750 aa 
Translation table11 
GC content65% 
IMG OID643528012 
Producthelicase, RecD/TraA family 
Protein accessionYP_002424008 
Protein GI218533192 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.481799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCACGC AGGTGAACAA GCGGGCGAGA CCGGGGCAGT TCGAACGTGG CGCTCCCGTC 
GAGACGCTTG CCGGGACGGT CGAGCGCGTC ACCTTCCACA ATGCCGAGAC CGGCTTCTGC
GTGCTCAAGG TACAGGCCCG CGGCAAGCGC GATCTCGTTC CTGTAGTTGG GCATGCGCCC
GCGATCGGAG CAGGCGAGTG GATCACCGCG ACCGGCATCT GGTTCACCGA TCGCCAGCAC
GGCCTCCAGT TCAAGGCCGA CACGCTGAAG GCGACGCCAC CTATCGGCGT GGAAGGCATC
GAGAAGTACC TCGCCTCCGG CTACATGCGC GGCATTGGTC CGGCGATGGC GAAGCGGATC
GTGGCCCTGT TCGGAGAAAG CACCTTCGAA ATTATCGAGG CCGAGCCTGA CCGCCTGATG
GAGGTTGGCG GCATCGGCCC AAAACGCGCC GAGCGAATCG TGCGCGGCTG GGCTGAGCAG
AAGGCCGTGC GGGAGATCAT GCTGTTCCTG CACGCCCACG GCGTCGGCAC GGCGCGAGCG
GTTCGCATCT TCAAGACCTA CGGCCATGAG TCGATCAAGG TCATGACCGA GGACCCGTAC
CGCCTCGCCA GGGACATCCG CGGCATCGGC TTCAAGACGG CCGACGCGAT TGCGATGAAG
CTCGGGCTGA CGAAGGAGGC GCCTCAGCGG CTACGGGCTG GGGTGTCCTT CGCCCTCCAG
ACAGCCATGG ACGAGGGTCA CTGCGCGCTG CCGGTCGCTC GCCTGACGGA ACTCGCCCAG
AAGCTGCTGG AGGTCGAGGC CCCCCTGATC CGCTCGGCGG TCGCTGAGGA GATCGAGCGC
GGCGACGAGG TCATCCAGGA CATCATCGGC GATCAGGCAT GCGTGTTCCT CCGCGGCCTC
CACGCAGCCG AACGCGGCAT TGCCGACCGG CTGATCGAGC GGGCGTCCGG CACGCCGCCT
TGGTCGGAAA TCGACCTCGG CAAGGCTCTG CCCTGGGTCG AACAGAAGAC CGGCAAGGCG
CTCTCGCCAT CGCAGGCAGA GGCGGTCCGG CTGCTGCTCG CCTCCAAACT CTGCGTCATC
ACGGGCGGCC CAGGCGTGGG CAAGACCAGC ACGCTCGACT CCGTGCTGCG CATCCTTCAA
GCCAAAGGCG TGCACGTGCT CCTGGCTGCT CCGACCGGCC GCGCCGCCAA GCGGATGACT
GAGCAGACCG GGCTAGAGGC TAAGACCATT CACCGGCTGC TGGAGATTGA CCCCAAGCAC
GGGGGCTTCA CACGCGACGA GGAGAGCCCG CTCAATTGCG ACCTGCTCGT CATCGACGAG
ACCTCGATGG TGGACGTGCC GTTGATGAAC GCGCTCCTGA AGGCGGTGCC GCCGCGGGCA
GGTCTGCTTC TCGTAGGCGA TGTGGATCAG CTACCCTCAG TCGGACCAGG GCAGGTGCTG
GCGGACGTGA TCGCATCCGA ACGCGTGCCA GTGGCCCGAC TGACTGAGGT GTTCCGGCAG
GCGGCCGAGA GCCGGATCAT CGTCAATGCC CACCGGATCA ACCACGGCCA GATGCCAGAG
AGACCCCGTC CCGGCGAGAA GGCCGACTTC TACCTGATCG AGATCGATGA CCCTGAGGTC
GGCGTCGGTA AGCTGATCGA GATCGTCACG AGGCGCATCC CGCGGACTTT CGGGCTCGAT
CCCCTGCGGG ACGTGCAGGT TCTGACACCG ATGCAGAGAG GTTCGCTTGG CTCACGCAAC
CTCAACCACG AACTTCAGCG CGTGCTGAAC CCGAACCCAC CGGCACAGGT CGAGCGCTTC
GGCTGGCGTT TCGCGCCCGG CGACCGGGTC ATGGAAACCC AAAACGACTA TGACCGCGAG
GTGTTCAACG GTGACCTCGG CATGGTGGCC CGCATCGACG ACGACGAAGG AGCGGTAATT
GTCACCTTCG ACGATCGGGA GGTGATCTAC CCGTTCGGCG AACTCGACAC GTTGGTTCCT
GCCTTCGCCA CCACGATCCA CAAGAGTCAG GGCTCGGAGT ACCCGGCCGT GGTGATCCCG
ATCGTGACGC AGCACTTCAA CATGCTCGCC CGCAACCTGC TCTACACGGG TGTGACCCGC
GGCAAGCAAC TTGTCGTGCT GATCGGTCAG AGGAAGGCGA TCGGCATGGC CGTGCGGAGC
GGTCAGACGA AGCGTCGCTT CACGAAGCTG CGCGAGTGGC TTGTTGCCGG GGCCGGGCGC
GCATCGTCGG CGAAGCTACG GATTCCAAGC TGA
 
Protein sequence
MGTQVNKRAR PGQFERGAPV ETLAGTVERV TFHNAETGFC VLKVQARGKR DLVPVVGHAP 
AIGAGEWITA TGIWFTDRQH GLQFKADTLK ATPPIGVEGI EKYLASGYMR GIGPAMAKRI
VALFGESTFE IIEAEPDRLM EVGGIGPKRA ERIVRGWAEQ KAVREIMLFL HAHGVGTARA
VRIFKTYGHE SIKVMTEDPY RLARDIRGIG FKTADAIAMK LGLTKEAPQR LRAGVSFALQ
TAMDEGHCAL PVARLTELAQ KLLEVEAPLI RSAVAEEIER GDEVIQDIIG DQACVFLRGL
HAAERGIADR LIERASGTPP WSEIDLGKAL PWVEQKTGKA LSPSQAEAVR LLLASKLCVI
TGGPGVGKTS TLDSVLRILQ AKGVHVLLAA PTGRAAKRMT EQTGLEAKTI HRLLEIDPKH
GGFTRDEESP LNCDLLVIDE TSMVDVPLMN ALLKAVPPRA GLLLVGDVDQ LPSVGPGQVL
ADVIASERVP VARLTEVFRQ AAESRIIVNA HRINHGQMPE RPRPGEKADF YLIEIDDPEV
GVGKLIEIVT RRIPRTFGLD PLRDVQVLTP MQRGSLGSRN LNHELQRVLN PNPPAQVERF
GWRFAPGDRV METQNDYDRE VFNGDLGMVA RIDDDEGAVI VTFDDREVIY PFGELDTLVP
AFATTIHKSQ GSEYPAVVIP IVTQHFNMLA RNLLYTGVTR GKQLVVLIGQ RKAIGMAVRS
GQTKRRFTKL REWLVAGAGR ASSAKLRIPS