Gene Mchl_5317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5317 
Symbol 
ID7118419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5696052 
End bp5697116 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content65% 
IMG OID643528011 
Productintegrase family protein 
Protein accessionYP_002424007 
Protein GI218533191 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGGGC TCTATCGCCG CGGCGATGTC TGGTGGGTTC GGTTCAGGCG CAACGGCACC 
CACGTCCGCA AGAGCGCGAA GACAACGAGG AAGACAGAGG CGCAAGCCTA CCTGGAGCGT
TTGCTCGCGG AGCAGGCGGG ACGAGCACGC GGTGATGTTC CGCGGCATCG CTTCGAGGAA
GCCGTCGAGC GCTACTTCCA GGAAACGCGC GTCAGACCCA AAACTCTGAG CAGCTACCGG
AGCAACAGCC GGACGTTGGC GCCGAGCTTC AATGCGCTCC ACCTCGACGA GATCACGCGC
CGGGCCATCG CCGAGTTCGT CACCGCGAGG AAGCGGACCG GAGTCACGGA CACGACGATC
CGGCGCGATC TCGCCTTCTT GAGCGTGATT TGCTCGGCGT GCGGCCGGTG GGGCTGGCTG
GACACGAATC CGGTCACAAC CTTCGGCAAG CGCGGTCTAC GTGAAGGTCG TCCGCGGACG
CGATTCCTGA CGCAAGCCGA GTTCGATCGG CTCCTAGCCG CGGCATCGCC GAGCCTCCGC
CCCGCAATCA CCCTCGCCGT CGAGACCGGC ATGCGTCGTG AGGAACTGTT CGGCCTTACG
ATTACCGCCA TCGACCTGAA CCGGCGGGAG GTCCACCTAG AGCGAACGAA GACGGGATCA
CCGCGCCGGG TGCCGCTCTC GGACAAGGCC ATCACGACCA TCAAGGGCCT ACTAGACGAG
CCCGGTCGCC CGCGCTCGTC GTACCTTTTT TGCAAGGGCG ATGGCTCGCG CTACTGCGAC
ATGAAGAAGG GCTTCGGTGG GGCCTGTCGG CGGGCCAAGG TTACCAATAT GCGATGGCAC
GATCTGCGCC ACACCTTTGC AAGCTGGTAC GTCCAGCGCG GCGGCGATCT CTACCGCTTA
TCGCGCATCC TGGGCCACTC CGGCCTTCAG ATGACCGCGC GGTATGGGCA CCTTCGAGTC
GAAGACCTGC ACGAGGAGAT TGGAAGGGTG GCACAATACC GGCCACAGGA GCGTCTGATC
CGGTCGTCGA AACAGGGCGA GGAGGATCAT CTGCCGGACG CTTGA
 
Protein sequence
MAGLYRRGDV WWVRFRRNGT HVRKSAKTTR KTEAQAYLER LLAEQAGRAR GDVPRHRFEE 
AVERYFQETR VRPKTLSSYR SNSRTLAPSF NALHLDEITR RAIAEFVTAR KRTGVTDTTI
RRDLAFLSVI CSACGRWGWL DTNPVTTFGK RGLREGRPRT RFLTQAEFDR LLAAASPSLR
PAITLAVETG MRREELFGLT ITAIDLNRRE VHLERTKTGS PRRVPLSDKA ITTIKGLLDE
PGRPRSSYLF CKGDGSRYCD MKKGFGGACR RAKVTNMRWH DLRHTFASWY VQRGGDLYRL
SRILGHSGLQ MTARYGHLRV EDLHEEIGRV AQYRPQERLI RSSKQGEEDH LPDA