| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5296 |
|---|
| Symbol | |
|---|
| ID | 7118397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 5672075 |
|---|
| End bp | 5673847 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643527989 |
|---|
| Product | cyclic beta-1,2-glucan ABC transporter |
|---|
| Protein accession | YP_002423986 |
|---|
| Protein GI | 218533170 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR01192] glucan exporter ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.859182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.362454 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATGA TTCGCCTCTA TGCGCGGGTG CTCGGCCTGC TGGGAGCGGA AAAGCGGCTG
GCCGCCGGCT TGATCGCGGC CAATGTCGCG CTCGCGGTGG CAGCCTTTGC CGAGCCGCTA
ATCATGGGCC GCATCATCGA CGGCCTGACC CATCTGTCCA AGGACGCGCC CGCCACGGCG
CTGGCGCCCT GGATCATCGC ATGGGTCGTG TTCGGCCTGT TCACCATCGG GGCGGGCGTC
GCGATCGCGC TGCATTCCGA CCGGCTGGCC CACCGCAACC GGCTCTCGAC CATGGCGAAC
TTCTTCGAGC ACGTGCTCGA ACTGCCGATC GCCTTCCATT CGTCCAACCA TTCCGGCCGC
GTGCTGAAGG CGATGCTGGA AGGCACGAAT GCCATGGCCT GGGTCTGGCT CAACTTCTTC
CGCGAGCACT TCTCCGCGCT GCTCTCCGTC GGCGTGCTCC TGCCGCTGAC GCTGTTCGTG
AACTGGCGTC TCGGCGCGAT CCTCGTCGTG CTGGTTCTCG CCTTCACGGC GCTCGCCAGC
TACGTCCTGC GCCGGACCGA GACGCTCCAG GGCGAGGTCG AGGAGTTCCA GTCGGGGCTG
GCCGCCCACG CCTCCGACGC GCTCGGCAAC GTCGCGGTGA TCCAGTCCTT CACCCGTGCG
CGCGCCGAGA AGGAGGCGAT GCGCACCATC ATCCAGGACC TGCTCCGCGT GCAGATCCCG
GTCCTGTCGT GGTGGGCGCT GGCCAACGTC GCCACCCGCG CCTCCGGCAC GCTGACCATG
ACGGCGATCT TCATCACCGG CATCGCCCTG CACCAGAAGG GCGCGGCCAC GGTCGGCGAG
ATCGTCGCCT TCATGAGCCT CGCCACCATG CTCGTGACCA AGCTCGACCA CGTCGTGACC
TTCGTGAACG GCGTGTTCAT GCAGGCTCCG AAGATGCGCG AGTTCTTCGA GGTGTTCGAC
ACCGTGCCGA CTGTCCGCGA CCGGCCGCAT GCCAAGCATG TCGCCCGGTT CGAGGGCGAG
GTGACCTTCG ACGAGGTCGC CTTCTCCTAT GACGGCCGCC GCAGCGCTCT CGACGGCGTG
TCCTTCGCGG CCCGCCCTGG CGAGACGGTG GCGCTCGTCG GCACCACGGG TTCGGGCAAG
TCCACCACCC TGGGCCTGCT GCACCGGACC TTCGATCCCG ATGCCGGCGC CATCCGCATC
GACGGCATCG ACATCCGCGA CATCGGCCTG TCGAGCCTGC GCCACAATAT CGGCGTCGTC
TTCCAGGAGC CGATGCTGTT CAACCGCTCG ATCCGCGAGA ACCTCCAGGT CGGCCGCCCC
GACGCGACCG ATGCCGAGAT GCTCGACGCC CTCGATCGGG CACAGGCCAG CGAGTTCATG
GCGCGCCAGC CCGATGGACT CGACACGATC ATCGGCGAGC GCGGCCGGTC GCTGTCCGGT
GGCGAGCGCC AGCGCCTCTC CATCGCGCGG GCGTTGCTGA AGAACCCGCC GATGCTGATC
CTCGACGAGG CGACCAGCGC CCTCGACGCG GCGACCGAGC GCAAGCTGCA GCAGGCGCTG
GAGACGGTGA TGGAGGGACG CACGACCTTC GTGATCGCCC ACCGCCTCGC CACGATCCGC
AACGCCGACC GCATCCTCGT GTTCGAGAAC GGCAAGATCG TCGAGGCCGG CAATTTCGAC
GAGCTGGTCG CCCTCAACCA GCGCTTCGCC ACGCTCGCCC GGGCTCAGTT CATGGCGGCC
GAGGCCGAGG ACGACATGCC GCTGGCCGCC TGA
|
|---|
| Protein sequence | MSMIRLYARV LGLLGAEKRL AAGLIAANVA LAVAAFAEPL IMGRIIDGLT HLSKDAPATA
LAPWIIAWVV FGLFTIGAGV AIALHSDRLA HRNRLSTMAN FFEHVLELPI AFHSSNHSGR
VLKAMLEGTN AMAWVWLNFF REHFSALLSV GVLLPLTLFV NWRLGAILVV LVLAFTALAS
YVLRRTETLQ GEVEEFQSGL AAHASDALGN VAVIQSFTRA RAEKEAMRTI IQDLLRVQIP
VLSWWALANV ATRASGTLTM TAIFITGIAL HQKGAATVGE IVAFMSLATM LVTKLDHVVT
FVNGVFMQAP KMREFFEVFD TVPTVRDRPH AKHVARFEGE VTFDEVAFSY DGRRSALDGV
SFAARPGETV ALVGTTGSGK STTLGLLHRT FDPDAGAIRI DGIDIRDIGL SSLRHNIGVV
FQEPMLFNRS IRENLQVGRP DATDAEMLDA LDRAQASEFM ARQPDGLDTI IGERGRSLSG
GERQRLSIAR ALLKNPPMLI LDEATSALDA ATERKLQQAL ETVMEGRTTF VIAHRLATIR
NADRILVFEN GKIVEAGNFD ELVALNQRFA TLARAQFMAA EAEDDMPLAA
|
|---|
| |