Gene Mchl_5253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5253 
Symbol 
ID7113861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5624430 
End bp5625890 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content71% 
IMG OID643527946 
ProductO-antigen and teichoic acid-like export protein 
Protein accessionYP_002423943 
Protein GI218533127 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA TCGCCGCCTT CGTCCTCAAT GCCGGGCTGA ACTTCATCCT CGGCATCGCC 
ATCGCCCGAA TGCTGGGGCC GGCCGATTTC GGCCGGTTCG CCCTGGCGAC GGCCGGCGCG
GTCGTGCTCA ACACGATCCT GTTCGAGTGG CTGCGGCTCT CGGCGACGCG GTTCTATTCG
GCGCGGGTAC GCGAGGCCGA GCCCTGGATC CGCCAGGGGC TCGACCGGGC GTACTGGGTC
ATCGCGCTGG CGCTGTTTGC CACGGCCGCC CTCTGCGCCG GGCTCGGGAT CGCGGTCAAT
CCGACCCCCG AGGGGCGTCT GGTCATGACC GCCGGCACCA TGGTCGCGGC GATCGGGATC
GGGCTGTTCG ACTATCACGC GGCGCTCGCC CGCGCCCGCT TCATCGGCAG CGCCTATCTC
CGGCTCGTGG TGTGGAAGAA CGTCCTGGCC TTCGTGCTGA TGGCCGGCAC GGCATGGCTG
TTTCCGCAGC CGGTCTGGGT GCTGATCGCA GGGGGCTTGA GCCAGTTCCT GGCGGTGCTG
CCGATGCGCA AGATCCTGGG CGACGGGCTC TTGGGGCACG CGCCCGCCCT GCCCCACGGT
CGAGCCCGTG AGACTCTGCG CCTGTTCGCG GCCTACGGCC TGCCCTTGAT CGCGGCCAAC
GCCGTCTATC AGATCATGCC CTTCCTCAAC CGCGCCGCCA TCGCCGGCAC CGCCGGCTTT
GCCGAGGCCG GCTATTTCGC TCTCGCCGCC GATCTCGGCT CGCGGGCCTT CTCGACGCTC
GGGGCCGCGC TCGATCTGCT GCTGTTTCAG ATCGCCGTGC AGGCCGAGGA GCATCATGGC
CGCGAGGCCG CCGAGACGCA GGTCGCGCGC AACATCGCCA TCGTGGTGGC GCTGCTCCTG
CCCTGCGCCG CCGGCTACTG GGCCGTGACG CCGGCCCTCC AGGCGCTGAT CGTGCCGGAG
GAGTTTCGCG GGCCGTTCGC GGACTACACC AACCTGCTGA TCCCGGGCCT GTTCTGCCTC
TCGATCATGA ATTTCGCCCT CAATCCCATC TTCCAGATCC GACGCCGGAC GAGCCCGGTG
GTCGCCGCCG CGCTCATCGG GCTGGCCGTC AACGCCGTCG GCCTTGTCCT GCTGCCGCGG
ATGATGGGAC CGCAGGGCGT CGCCGTCGCG CAGACCTTGG GGCTCGTCGC GGCGGTCGCC
GTGCTCGGCC TGCGGGCGCT AACGGGGATC GAGCGCCTGC GCCTGCCGGG CCGCGACCTC
GCCCTCACCG CCGCCGCCTG CCTCGCCATG GTTCTGGCCG TGCTGCCGTT CCGCGGCCTG
GAGCCGGCGC TCGCCCTGCC CGCCTGCATT GGGGCCGGAA TGATCGTCTA CGGCGCCCTC
GTCTGGTTCC TCGACATCGC CGGCCTGCGC AGCGCCGTGC GCCAGCGTTT CCCGAAGCGG
CTGCCGGCCG CCGCGCGGTA G
 
Protein sequence
MAVIAAFVLN AGLNFILGIA IARMLGPADF GRFALATAGA VVLNTILFEW LRLSATRFYS 
ARVREAEPWI RQGLDRAYWV IALALFATAA LCAGLGIAVN PTPEGRLVMT AGTMVAAIGI
GLFDYHAALA RARFIGSAYL RLVVWKNVLA FVLMAGTAWL FPQPVWVLIA GGLSQFLAVL
PMRKILGDGL LGHAPALPHG RARETLRLFA AYGLPLIAAN AVYQIMPFLN RAAIAGTAGF
AEAGYFALAA DLGSRAFSTL GAALDLLLFQ IAVQAEEHHG REAAETQVAR NIAIVVALLL
PCAAGYWAVT PALQALIVPE EFRGPFADYT NLLIPGLFCL SIMNFALNPI FQIRRRTSPV
VAAALIGLAV NAVGLVLLPR MMGPQGVAVA QTLGLVAAVA VLGLRALTGI ERLRLPGRDL
ALTAAACLAM VLAVLPFRGL EPALALPACI GAGMIVYGAL VWFLDIAGLR SAVRQRFPKR
LPAAAR