Gene Mchl_5230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5230 
Symbol 
ID7113838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5597520 
End bp5598236 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content67% 
IMG OID643527923 
Productprotein TolQ 
Protein accessionYP_002423920 
Protein GI218533104 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.811663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0703567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCAG CCGATGCCAT GCAGGCCGCG CCCGTCGCAG ACATGAGCCT GTTCGGCCTG 
TTCTGGCAGG CCCACTTCGT CGTGAAGCTC GTGATGGTGG GCCTGCTCGG CGCCTCGATC
TGGTGCTGGT CGATCATCGT CGACAAGACG CTGCTGTTCC GCCGCACCGA AGCCGAGATG
GACGCCTTCG AGGAGGCGTT CTGGTCCGGC CGCTCGCTGG AGGAACTGTA CCGCTCCTTC
AACGACCGTC AGCCCACCGG ACTCGGTGCG CTGTTCGTCG CCGCCATGCG GGAGTGGAAG
CGCTCCTTCG AAGGTTCGGG CCGGCAGATC CACTCGCTGT CGCAGCGCAT CGACAAGGTG
CTCGATGTCA CGATCCAGCG CGAGGTCGAG CGGCTCGATT CCCGCCTCCT GTTCCTCGCC
TCGATCGGCT CGGCCGGCCC CTATATCGGC CTGTTCGGCA CGGTCTGGGG CATCATGACC
GCCTTCACCT CGATCGCGGC CTCCAAGAAC ACGTCGCTCG CCGTTGTGGC GCCCGGCATT
GCCGAGGCCC TGTTCGCCAC CGCCATCGGC CTGTTCGCGG CGATTCCCGC GGTGCTCGCC
TACAACAAGC TTCAGGCCAC CGTGGCGAAG TCGCAATCGC GGCTCGAAGG CTTCGCCGAC
GAGTTCTCGG CGATCCTGTC GCGGCAGATC GACGAGCGCC TCTCGGTCGC CGCCTGA
 
Protein sequence
MTPADAMQAA PVADMSLFGL FWQAHFVVKL VMVGLLGASI WCWSIIVDKT LLFRRTEAEM 
DAFEEAFWSG RSLEELYRSF NDRQPTGLGA LFVAAMREWK RSFEGSGRQI HSLSQRIDKV
LDVTIQREVE RLDSRLLFLA SIGSAGPYIG LFGTVWGIMT AFTSIAASKN TSLAVVAPGI
AEALFATAIG LFAAIPAVLA YNKLQATVAK SQSRLEGFAD EFSAILSRQI DERLSVAA