| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5227 |
|---|
| Symbol | |
|---|
| ID | 7113835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 5594172 |
|---|
| End bp | 5595512 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643527920 |
|---|
| Product | Tol-Pal system beta propeller repeat protein TolB |
|---|
| Protein accession | YP_002423917 |
|---|
| Protein GI | 218533101 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
|---|
| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.175544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.115662 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGAA CAGCCTTCAC CCGGCGCACT CTCCTGCCGG CGCTCACGGC CGCGCTCGGC
GTCCTCGCCC TGGCGCTGCC CGCCGCGACG CCGGCGCGGG CGCAGCTTCA ACTCCGCATC
GGCAGCGGCG CCTTTCAGCC GATGCCGATC GCCGTCGCCG ACTTCGCCGG TGACGCCAGC
CTCGGCACGC TGGTCGCCAG CGTGATCACG AACAATCTGC GCCGCTCCGG CTACTTCACG
CCGCTGGAGA AGGGGCGCTT CCCCGAGAAC CCGAGCTTCG ATGCGGCGCC GAACTTCGAG
GCGTGGAAGG GCGCGGGCGT CCAAGCGCTC GTGACCGGCC GGGTCGGGCG CGACGCCTCA
GGCCGGCTCA CCGTCGCCTT CCGCCTGTGG GACGTGGCCT CGGGCCAGCA GATCACGGGT
CAGCAATACG GCACCGACGT CGCCAACGCG CGCCGCACCG GGCATCTCGT CTCGGACGCG
GTCTACACCA AGGTCACCGG CCTCGGGCCG TGGTTCGACA GCCGCGTCGC CTTTGTCGAT
GAGTCCGGCC CGAAGGAGAA CCGCCGCAAG CGCCTGATGG TGATGGATCA GGACGGCGCC
AACGTCCGCG CGCTGACCGG GGGCGGCGAC GTCTCGGTGG TGGCGCCGCG CTACTCGCCG
GCGGGGCAGG ACATCGCCTT CATGACCCAG GCGCCGGGCC AGCAGCCCAA GGTCCAGATG
ATCGATCTGG AGACCGGCAA GCGTCAGACG GTCGGCAACT TCGCCTCGAT GAGCGCGAGC
CCGCGCTTCT CGCCGGACGG GCGGCGCCTC GTGATGAGCG TGCAGCAGGG CGGCAACGCC
GACATCGTCA CCGTCGATAT CGCCTCGAAG GCGCAGACGC CGGTCACGCA AGGTCTCGCG
ATCGACACCT CGCCGAGCTA CGCGCCCGAC GGCAGCCAGA TCGTGTTCGA ATCCGACCGC
GGCGGCTCGC AGCAAATCTA TGTGATGGGC GCCGACGGCT CGAACCCGCG CCGGCTCTCC
TTCGGCGAAG GCTCGGCCTC GCAGCCGGCT TGGTCGCCCC GCGGCGACCT CATCGCCTTC
ACCCGGCAGC GCAAGGGCGG CTTTGCCATC TGTGTGATGA AGCCCGACGG CTCGGGCGAG
CGGGTGCTGA CCGAGGGCTT CCACAACGAG AGCCCGACCT TCGCGCCGAA CGGCCAGTAC
GTGATGTTCT TCCGTGATCC CGGCGGCCAG GGCGGCGGCA AGCTCTACAT GGTCGACATC
ACCGGCAAGG TGGAGCAGCC GGTGCCGACC CCGTCCTTCG CCTCGGACCC AACCTGGTCG
CCGCTGCTGT CGGGCAAGTA A
|
|---|
| Protein sequence | MPGTAFTRRT LLPALTAALG VLALALPAAT PARAQLQLRI GSGAFQPMPI AVADFAGDAS
LGTLVASVIT NNLRRSGYFT PLEKGRFPEN PSFDAAPNFE AWKGAGVQAL VTGRVGRDAS
GRLTVAFRLW DVASGQQITG QQYGTDVANA RRTGHLVSDA VYTKVTGLGP WFDSRVAFVD
ESGPKENRRK RLMVMDQDGA NVRALTGGGD VSVVAPRYSP AGQDIAFMTQ APGQQPKVQM
IDLETGKRQT VGNFASMSAS PRFSPDGRRL VMSVQQGGNA DIVTVDIASK AQTPVTQGLA
IDTSPSYAPD GSQIVFESDR GGSQQIYVMG ADGSNPRRLS FGEGSASQPA WSPRGDLIAF
TRQRKGGFAI CVMKPDGSGE RVLTEGFHNE SPTFAPNGQY VMFFRDPGGQ GGGKLYMVDI
TGKVEQPVPT PSFASDPTWS PLLSGK
|
|---|
| |