Gene Mchl_5217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5217 
Symbol 
ID7113825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5584111 
End bp5585325 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content69% 
IMG OID643527910 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002423907 
Protein GI218533091 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.877552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0536068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACG ACAGCGACCG GTTCATCGAG GCCGGGACGC CGACCTTTCG CCGGGCGACG 
CTCGCCCTGT TCGCGGCGGG GTTTTCCACC TTCGCGGTGC TCTACGGCGT CCAGCCGCTG
CTGCCGATCT TTCACGACAC CTTCGCGGTC TCCCCGGCCG AGAGCAGCCT CGCGCTGTCG
CTGCCCTGCG CCACGCTCGC GATCGCGCTG CTGATCGTCA GCCCGCTCTC CGAGGTGTGG
GGGCGCAAGC GGGTGATGGC GGTCTCGCTG TTCGCCTCGG CCCTGCTCAC CATCGGCGCC
GTTTTGATGC CGAGCTGGCA TGGATTCCTC GTGCTACGGG CGCTCACCGG CATCGCCGCG
AGCGGCTTGC CCGCCGTCGC CATGGCCTAT CTCGGTGAGG AGATGCACGG CCGCGCCATC
GGCCTGTCGA TGGGGCTGCT GATCGGCGGC AACGCGCTCG GCGGCATGGT TGGGCGGCTG
CTGGCGGGGG TGATCGCCGA TCACGCCTCC TGGCGCTGGG GCCTTGGCAT CATCGGCGTG
CTGGCGTTGT TCGCGGCTCT GGCCTTCGAG TTCGCCCTGC CGCCCTCGCG GCACTTTCTC
GCCCACCGGA TGCGCTGGCG CGAGGTGCCG GGCACCTTCA CCCACCATTT CCGGGATGCG
GGCCTGCCCT GGCTGTTCTT CGAACCGTTC CTGCTGATGG GCGGCTTCGT CTGTGTCTAC
AACTACATCG GCTTCCGCCT GCTCGATCCG CCGTTCTCGT TGAGCCAGAC GGTGATCGGC
CTGATCTTCA TCGTTTACCT CGCCGGCACC GCGAGTTCGG CCATCACCGG CCACATCGCC
GGGGTGCTGG GGCGGCGCAA GGTGCTGTGG CTGGCGATCC TGCTCGGAAT CGGCGGCATC
GCCCTGACGC TGGCGGACAA CCTCGTGCTC ATCATCAGTG GCATCGTCGT CGTCACGGTC
AGCTTCTTCG GCGCGCATTC GGTGGCGTCG AGCTGGGTCG GGCGCCGGGC CTCGAGCGAC
CGGGCACAGG CCTCCGCGAT CTATCTCTGC ATGTACTATC TCGGCTCGTC CCTGCTCGGC
ACGGCGGGCG GCTGGTTCTT CCTGCATTAC GGCTGGCCCG GCGTCGCGGG CTTCTTCGGC
AGCCTCTACG TGGCGGCTTT GCTCATCGCG CTGCGCTTGA CGCGGCTCGC GCCACTCCCG
CCCACGGGCG GCTGA
 
Protein sequence
MADDSDRFIE AGTPTFRRAT LALFAAGFST FAVLYGVQPL LPIFHDTFAV SPAESSLALS 
LPCATLAIAL LIVSPLSEVW GRKRVMAVSL FASALLTIGA VLMPSWHGFL VLRALTGIAA
SGLPAVAMAY LGEEMHGRAI GLSMGLLIGG NALGGMVGRL LAGVIADHAS WRWGLGIIGV
LALFAALAFE FALPPSRHFL AHRMRWREVP GTFTHHFRDA GLPWLFFEPF LLMGGFVCVY
NYIGFRLLDP PFSLSQTVIG LIFIVYLAGT ASSAITGHIA GVLGRRKVLW LAILLGIGGI
ALTLADNLVL IISGIVVVTV SFFGAHSVAS SWVGRRASSD RAQASAIYLC MYYLGSSLLG
TAGGWFFLHY GWPGVAGFFG SLYVAALLIA LRLTRLAPLP PTGG