| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5216 |
|---|
| Symbol | |
|---|
| ID | 7113824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 5581765 |
|---|
| End bp | 5583936 |
|---|
| Gene Length | 2172 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643527909 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_002423906 |
|---|
| Protein GI | 218533090 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.152488 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATGA CCCGCTCGCT GCTCCTTGCC GGCACCATGC TGCCCGCGCT CGTCCTGTCC
GATCTGTCCG CAGCGCGGTC TCTCAGTGAC GGCGGGCGGA TCGAACTGGC CCAGCGCGAG
GATGCCGGCG AGGGACCGCG CGGTGGCGGA CGCGGACCGG GTGGTCCCGG CGGACCCGGT
GGTGCCGGCC CGGCGGAGCG TGGCGGCGTC GAGCGCGGTG GCCCGCCGGC AAGGGAGAGG
CCGGAAAGAT CCGAGCGTCC GGAGCGGCCC GAGCCGCGCC AAGCGCCTGC CGCCCGTGAG
CGGCCCGAGC CCGCCGAGCG GCCGGCTCGT CCCGAACGTC CGGCGGCGCA GGAGCGGCAA
GAGCGGCCCG AGCGCCAGGA GCGTCCCGAC CGCCAGGAAC GTCAAGAGCG TCCTGATCGT
CAGGAGCGTC CGGACCGTCC CGAACGTGCG GCACCGCCCC AGCGGCCCGA TCGCTCCGAA
GAACGGCCGG CGGCGCCTGC GTCCCGCGAG CGCACGCCGG ACCGCGACGC ACCCGCTCGG
CGCGAAGCGC CCGAGCGCGA GGCGCCGGCC CGACGCGAGA GCCCGGACCG GCTCGACCGT
GATGGTCAGG ACCGTCCGGG CCGTCCCGCC GGCCGCGAGG CCGATCGCCC CGACAGCGCC
CCGAACCAGC GCCGTGCTCC GAACGCGCCG ACGCCGCCCA ATGCGGAACG CCCGGAGCAG
CCGACGACGC CGTCGGCCCC GAATCCGGCT CAGCCGAACA CCCCGCCGAA CCAGCGGCCC
GGTGTTCCCG GCCGTCCGGC GACGCCGAAT GTGCAGCAGC CCACCCGACC GGACCAGCCG
GCCGCACCCT CCGCGGCGCA GCCCGACGGC ACGCGGGAGG CGCCCGGCGG TCGCACGCCG
CCGAATCAGC AGCCCGGCGT TCCCGGCCGT CCGGTGGCGC CGAACCAGCA ACCCGGTGTT
CCCGGCCGTC CGGTTCAACC GCCTGATGGT GCGGCCCCGA CCCAGCCCGG TGCCGTCCCG
CTGGGCCAGC CGGCGCCGGC TCCCGGCACA CAGCCGGATT CGCGCAGCCT CGATGATCGT
CGCGACGGCG ACCGCCGCGA TGACCGGCGC GGCGACCCCA ATGACCGCCG TGACGGTGAT
CGCCGCGACG AAAACCGGTT CGATGACCGC CGTGGCGAGC GTCGCGACCG CTTCAACGTG
CCGGGCACGC CGGCCTACGT CCCCGGCGGC TTCCGCGACG ACGATTATCG CGGCCGCGAC
TACGACACGA TCCGCCGCGA CCGCCGCGAG TACGATGTCG ATGGCCGGAC CTATTACCGG
GAGCCCGGCC GCATCATCGT GCGCGACCGC GACACCACCT TCATCCGCCA CGACGAGAAC
GAGCGCTTCC GCACCATCTA TGGCGACCGC GGCTATCGCA GCGAGCGGCG TGGCGGCGAG
ATCTACAGCT ACGTCGACAG CCCGGCGGGC GGCCAGATCA TCACCGTCGT GGACGATGAC
GGCCGGCTCC TGCGCCGTTC CCGCCGCTAC CGCGACGGCC GCGAGGTGGT GATCATCAAC
AACGCCTATG GCGGTGCGCC CCGGCCGATC TACGAGGACG TGGTGGAACT GCCGCCGCCG
GACATCCGCA TCCCCCGCGA CCGCTACGTG GTCGATTACG AGCAGGCGGA CGAGCGCGCC
GTCTACGAGG CGCTCTCAGC TCCGCCGGTG CAGAAGCTCG ATCGGCGCTA CACGCTCGAT
CAGGTGCGCT ACAGCCCGCA GCTGCGGGCG CGGATGCCGT CGGTGGACAT CAACACGATC
ACCTTCGACA CCGGCTCCTT CACCGTCACG CCCGATCAGG CCAAGCGCCT CTCGACCATC
GCCGAGGCGA TCAACCGGAC GATCAAGGAC AATCCGCAGG AGGTGTTCCT GATCGAGGGC
TACACCGATG CGGTCGGCTC GGACATCGAC AACCTCTCGC TCTCCGACCG CCGGGCGCAG
TCGGTCGCCT CGGTGCTGAC GCAGAACTTC CAGGTGCCGC CGGAGAACCT CACCACGCAG
GGCTACGGCG AACAGTACCT GAAGGTGAAC ACGCAGGACG CCAACCGCGA GAACCGCCGC
GTCACCGTCC GCCGCATCAC CCCGCTGCTC CAGCAGCAGG CGGAGGGGCA ACAACCTGCT
GCACCGCGTT AA
|
|---|
| Protein sequence | MRMTRSLLLA GTMLPALVLS DLSAARSLSD GGRIELAQRE DAGEGPRGGG RGPGGPGGPG
GAGPAERGGV ERGGPPARER PERSERPERP EPRQAPAARE RPEPAERPAR PERPAAQERQ
ERPERQERPD RQERQERPDR QERPDRPERA APPQRPDRSE ERPAAPASRE RTPDRDAPAR
REAPEREAPA RRESPDRLDR DGQDRPGRPA GREADRPDSA PNQRRAPNAP TPPNAERPEQ
PTTPSAPNPA QPNTPPNQRP GVPGRPATPN VQQPTRPDQP AAPSAAQPDG TREAPGGRTP
PNQQPGVPGR PVAPNQQPGV PGRPVQPPDG AAPTQPGAVP LGQPAPAPGT QPDSRSLDDR
RDGDRRDDRR GDPNDRRDGD RRDENRFDDR RGERRDRFNV PGTPAYVPGG FRDDDYRGRD
YDTIRRDRRE YDVDGRTYYR EPGRIIVRDR DTTFIRHDEN ERFRTIYGDR GYRSERRGGE
IYSYVDSPAG GQIITVVDDD GRLLRRSRRY RDGREVVIIN NAYGGAPRPI YEDVVELPPP
DIRIPRDRYV VDYEQADERA VYEALSAPPV QKLDRRYTLD QVRYSPQLRA RMPSVDINTI
TFDTGSFTVT PDQAKRLSTI AEAINRTIKD NPQEVFLIEG YTDAVGSDID NLSLSDRRAQ
SVASVLTQNF QVPPENLTTQ GYGEQYLKVN TQDANRENRR VTVRRITPLL QQQAEGQQPA
APR
|
|---|
| |