| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5204 |
|---|
| Symbol | rpsD |
|---|
| ID | 7116244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 5568965 |
|---|
| End bp | 5569582 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643527897 |
|---|
| Product | 30S ribosomal protein S4 |
|---|
| Protein accession | YP_002423894 |
|---|
| Protein GI | 218533078 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
|---|
| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.795696 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.228879 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAC GCGTCCAGGC GAAGCACAAG CTCGATCGCC GCATGGGCCA GAACATCTGG
GGTCGCCCGA AGAGCCCCGT GAACCGCCGC GAATACGGCC CCGGCCAGCA CGGCCAGCGC
CGCAAGGGCA AGATGAGCGA CTTCGGCACG CAGCTGCGCG CCAAGCAGAA GCTCAAGGGC
TACTACGGCA ACATCACCGA GAAGCAGTTC CGCCGTTACT ACGCCGAGGC GATCCGCCTG
CGCGGTGACT CCGGCGAGAA CCTGATCGGT CTGCTCGAGC GCCGCCTCGA CGCCGTGGTG
TACCGTTCGA AGTTCGTGGC GACCCCGTTC GCGGCGCGCC AGTTCGTCAA CCACGGGCAC
ATCAAGGTCA ACGGCCGCCG GGTCAACATC CCGAGCTACC AGGTCAAGGC CGGCGACGTG
ATCGAGGTGA AGGAAGCCTC CCGCCAGCTC GAGATCGTGG TCGTGGCTTC GCAGCTCGCC
GAGCGCGACG TGCCGGACTA CATCGAGGTC GATCATCACA AGATGACCGC CCGCGTCACC
CGGATCCCGG GCCTCACCGA GGTGCCCTAC CCGGTGCAGA TGGAACCGAA CCTCGTCATC
GAGTTCTACT CGCGCTAA
|
|---|
| Protein sequence | MSKRVQAKHK LDRRMGQNIW GRPKSPVNRR EYGPGQHGQR RKGKMSDFGT QLRAKQKLKG
YYGNITEKQF RRYYAEAIRL RGDSGENLIG LLERRLDAVV YRSKFVATPF AARQFVNHGH
IKVNGRRVNI PSYQVKAGDV IEVKEASRQL EIVVVASQLA ERDVPDYIEV DHHKMTARVT
RIPGLTEVPY PVQMEPNLVI EFYSR
|
|---|
| |