Gene Mchl_5203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5203 
Symbol 
ID7116243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5567316 
End bp5568512 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content71% 
IMG OID643527896 
Productlytic murein transglycosylase 
Protein accessionYP_002423893 
Protein GI218533077 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.511887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGC CAGCCACCCG CGCCAGCCTG ATCGGGCTTG CCCTTGCCAG CGGCCTTCTC 
GCCGGCCCCG CGCGAGCCGA TTTCCAATCT TGCCTTGCCG GCATCCAGGC GCAGGCCGCC
GGGGCCGGCG TCTCGGCCCA GACCTTCCGC GCCGCGACGG CCAACATCGC CTACGACGAC
AAGGTGATCG AGCTGTCCCA GGCGCAGCCG GAATTCAAGA CGCCGATCTG GGACTACATG
TCGGCGCTGG TCGATGAGGA GCGGGTCGAG GACGGGCGCG CGGCCATGCG CCAGCATGCC
CAGGCCTTGG CGAACGCGGA GGCACGCTAC GGCGTCGATC GTCACACCAT CGCCGCGGTG
TGGGGCGTCG AGTCCAATTT CGGCAAGAAC CTCGGCAAGA TGCCGCTGGT GCAGTCGCTT
GCCACGCTCG CCTGCTCGAG CAACCGCCGT CGCGACTTCT TCCGCACCGA ACTGATCGCG
ACGCTGAAGA TCATCGAGCG CGGCGACATC GAAGCCTCGC GGCTGACCGG CTCTTGGGCC
GGCGCCTTCG GCCAGACGCA GTTCATGCCG ACCACCTACC AGCGTCTGGC CGTGGACGGC
GACGGCGACG GGCGGCGCGA CGTGGTCGAT TCGGTGGCCG ACGCGGTCGC CTCCACCGCC
AACTTCCTGC GCGTCGCCAA ATGGTCGAAC GGCCAGCCCT GGGGCTACGA GGTGCGGCTG
CCGCGCGGCT TCAACGTTGC CGCCGCGGGC CGCAAGAACA AGCACGCCGT CGGCCATTGG
GCCTCGCTCG GCGTCACCCG AGTCGATGGC AAGGCGCTGA CGGGGGAGGG GCCTGCCGGC
ATCATCGCGC CCGCCGGTAT CAACGGCCCG GCCTTCCTCG TGACGAAGAA CTTCGACGCG
ATTTATTCCT ACAACGCCGC CGAATCCTAC GGGCTGGCCA TCGCCGTCCT CTCGGACCGC
CTGCGGGGCC GCCCCGGCGT CCAGGCCGAC TGGCCGACCG ACGATCCGCC GCTCTCGCGT
GCCGAGCGCC GCGACCTCCA GACCCGCCTG ACCGCTCGCG GCTACGATGT CGGCGAGCCG
GACGGCAAGG TCGGCTCCAA GACCCGCGAG GCGATCAAGG AGATCGAGCG CCAACTCGGC
ATGCCCGCCA CCGGGCGGCC GGGCGGCAAG GTGCTGGAGG CGCTGCGGCG GGGGTAA
 
Protein sequence
MPTPATRASL IGLALASGLL AGPARADFQS CLAGIQAQAA GAGVSAQTFR AATANIAYDD 
KVIELSQAQP EFKTPIWDYM SALVDEERVE DGRAAMRQHA QALANAEARY GVDRHTIAAV
WGVESNFGKN LGKMPLVQSL ATLACSSNRR RDFFRTELIA TLKIIERGDI EASRLTGSWA
GAFGQTQFMP TTYQRLAVDG DGDGRRDVVD SVADAVASTA NFLRVAKWSN GQPWGYEVRL
PRGFNVAAAG RKNKHAVGHW ASLGVTRVDG KALTGEGPAG IIAPAGINGP AFLVTKNFDA
IYSYNAAESY GLAIAVLSDR LRGRPGVQAD WPTDDPPLSR AERRDLQTRL TARGYDVGEP
DGKVGSKTRE AIKEIERQLG MPATGRPGGK VLEALRRG