Gene Mchl_5197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5197 
Symbol 
ID7116237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5561725 
End bp5562510 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID643527890 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_002423887 
Protein GI218533071 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.426896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC AAGGGAAAGC CGCCGTGGTC ACCGGCTCGA CGAGCGGCAT CGGCCTCGCC 
ATCGCCAAGA GCTTCGCCAA AGACGGCGCG AACGTGGTCC TCAACGGATT CGGCAACCCC
GAGGACATCG AGCGGACCCG AAGCGGCATC GAGAGCGAGT TCGGGGTCAA GGCGGTCTAT
TCGCCCGCCG ACCTCACCAA GCCGGACGAG ATCGGCGGGC TGATCGCACT CTCGGTCGAG
ACGTTCGGCA GCATCGACAT CCTCGTGAAC AATGCGGGCA TCCAGTACGT CTCGCCGATC
GAGGACTTTC CGGTCGAGAA GTGGGACCAG ATCATCGCCC TCAATCTCTG CTCGGCCTTT
CACACCCTGC GTGCGGCCGT GCCGCACATG AAGGCGAAGG GCTGGGGCCG GGTCATCAAC
ACGGCCTCGG CGCACTCGAT GGTCGCCTCG CCCTACAAGT CGGCCTACGT CGCGGCCAAG
CACGGCGTCG TCGGCCTCAC CAAGACGGCG GCGCTCGAAC TCGCCACCCA CGGCATCACG
GTGAACTGCA TCTCACCGGG CTATGTCTGG ACGCCGCTGG TGGAGAGCCA GATCCCGGAC
ACGATGAAGG CGCGCGGCCT CACCAAGGAG CAGGTGATCG AGGAGGTGCT GCTCAAGGCG
CAGCCGACCA AGGAATTCGT GACGATCGAT CAGGTGGCCG CGCTCGCCCT GTTCCTGTGC
ACGGACAGCG CCAGCCAGAT CACCGGTGCC AACATCGCCA TGGATGGCGG CTGGACGGCG
CAGTAG
 
Protein sequence
MSLQGKAAVV TGSTSGIGLA IAKSFAKDGA NVVLNGFGNP EDIERTRSGI ESEFGVKAVY 
SPADLTKPDE IGGLIALSVE TFGSIDILVN NAGIQYVSPI EDFPVEKWDQ IIALNLCSAF
HTLRAAVPHM KAKGWGRVIN TASAHSMVAS PYKSAYVAAK HGVVGLTKTA ALELATHGIT
VNCISPGYVW TPLVESQIPD TMKARGLTKE QVIEEVLLKA QPTKEFVTID QVAALALFLC
TDSASQITGA NIAMDGGWTA Q