| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5148 |
|---|
| Symbol | |
|---|
| ID | 7116186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 5514244 |
|---|
| End bp | 5514966 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643527841 |
|---|
| Product | LexA repressor |
|---|
| Protein accession | YP_002423840 |
|---|
| Protein GI | 218533024 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.160291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0920185 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACCC GCAAGCAACT CGAACTGCTC CAGTTCATCC AGCAGAGGAT GCAGGAGAGC
GGTGTGCCGC CGTCCTTCGA CGAGATGAAG GACGCGCTCG ACCTGAAATC CAAATCCGGC
ATCCACCGCC TGATCATGGC GCTGGAAGAG CGCGGGTTTC TTCGCCGTCT GCCGAACCGG
GCGCGGGCGA TCGAAATTCT GCGCATGCCC GACATGCCGG CGGCCAAGCC CGCTTCGTCC
GAGCCGCGCC GCTTCACGCC GAGCGTGGTC GAGGGGGGCC TTTCGGCCAA GCCCGCCGCG
CCGAAGCCTC CCATGCTTCA GGCCCATGAT GGCAAGGGCC AATCGGTGAT GGTGCCGGTG
ATGGGCCGGA TCGCTGCCGG TGTGCCGATC TCGGCGATCG AGAGCCAGAG CCACTCGATT
TCGATGTCCC CCGACTTCCT GTCGGGCGGA GAGCATTACG CGCTGGAAGT GCGCGGCGAT
TCGATGATCG AGGCCGGCAT TCTCGATGGC GACCTCGTGG TGATCCACAA ACAGGAGACC
GCCAACAATG GCGACATCAT CGTCGCGCTG ATCGACGACG AGGAGGCGAC CCTCAAGCGC
CTTCGCCGCC GCGGCTCGTC GATCGCGCTG GAAGCCGCCA ACCCGGCCTA CGAGACCCGC
GTGCTCGGGC CCGACCGGGT GCGCATCCAG GGCAAGCTCG TCAGCCTCGT GCGCCGTTAC
TGA
|
|---|
| Protein sequence | MLTRKQLELL QFIQQRMQES GVPPSFDEMK DALDLKSKSG IHRLIMALEE RGFLRRLPNR
ARAIEILRMP DMPAAKPASS EPRRFTPSVV EGGLSAKPAA PKPPMLQAHD GKGQSVMVPV
MGRIAAGVPI SAIESQSHSI SMSPDFLSGG EHYALEVRGD SMIEAGILDG DLVVIHKQET
ANNGDIIVAL IDDEEATLKR LRRRGSSIAL EAANPAYETR VLGPDRVRIQ GKLVSLVRRY
|
|---|
| |