Gene Mchl_5111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5111 
Symbol 
ID7118986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5477823 
End bp5479043 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content71% 
IMG OID643527804 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_002423803 
Protein GI218532987 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.658987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.523719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAG CCGCGAAGTC CGGCCCGCTG GCCGGCGTGA AGGTCATCGA ACTCGCCCAC 
ATCATGGCCG GACCGGTCTG TGGGCTGATG CTCGGCGACA TGGGCGCCGA GGTCATCAAG
GTCGAGAAGA TCGAGGGTGG CGACGACACC CGCCGTTCGG TGCCGCCCGC GATCGAGGGC
GAGAGCGCCG CCTACATGAT GATGAACCGC GGCAAGAGCG GGATCGCCCT CGACCTCAAG
AGCGCGGACG GCAAGGCGGT GCTGCGGCGC CTGCTCGCCG ACGCCGACGT GCTGATCGAG
AACTACCGCG CCGGCACGAT GGAGCGGCTC GGCCTCGGCT ACGATGTCCT CGCCCGAGAG
TTTCCGGGGC TGGTCTATTG CTCGCTCTCG GGCTTCGGCC GTTCGGGCCC CTATGCCGAG
CGCGCGGGCT TCGACCTCGT GGCGCAGGGC ATGAGCGGGC TGATGAGCAT CACCGGCGAG
GGGCCGGGCC GGCCGCCGAT GAAGTGCGGC CCGCCGGTGA CCGACATCAC CGCCGGCATC
CTGGCGGCGA TGGGCGTGCT GGCCGCCCAT GTCCACAAGC TGAAGACCGG CGAGGGTCAG
GTCGTCGATA CCTCGCTATT CGAGGCCGGC ATCACCCTCA CCTACTGGCA ATCGGCCATC
GCCATGGCGA CCGGCGTCGC ACCGGGGCCG ATGGGCTCGG CCCATCCGCT GAACGCGCCC
TACGAGGCGT TCGAGACGGC AGACGGCTGG ATCACCATCG GCGCGGCCAA CCAGACCAAC
TGGCTGCGCC TGCTCGCGGT GCTCGGTGCC GAGGATCTCG CCGCCGATTC GCGCTTCTCG
GCCAACCGTG ATCGCATGGC GAACCGCGCC GCTCTGGCCG AGGCGCTGGC CCCACATTTC
CGCACCGCGC CCTCCGCCGA TTGGCTCGCG CGGCTGGAAG CCGGCGGCGT GCCGGCCGGA
CCCGTGCTCG ACGTGCTCGC GATGCAGGCC GATCCCCAAA CGCGTGCCCG CGAGATGGTG
GTCGAGGTCG AGCACGCCCG CGCCGGGCGG ATGAGCACGC TCGGCCTGCC GGTCAAATTC
TCGGCGACGC CGGGGCGGGT GCACGGCCCC GCGCCGATGC TCGGCGAACA CAGCCGCGCC
ATCCTGGCCC AAGCCGGCTA TGACGGAGCG GCGATCGACG ATCTGATCGC CCGGGGCGTC
GTGCGCGAGA CGACAGCCTG A
 
Protein sequence
MTEAAKSGPL AGVKVIELAH IMAGPVCGLM LGDMGAEVIK VEKIEGGDDT RRSVPPAIEG 
ESAAYMMMNR GKSGIALDLK SADGKAVLRR LLADADVLIE NYRAGTMERL GLGYDVLARE
FPGLVYCSLS GFGRSGPYAE RAGFDLVAQG MSGLMSITGE GPGRPPMKCG PPVTDITAGI
LAAMGVLAAH VHKLKTGEGQ VVDTSLFEAG ITLTYWQSAI AMATGVAPGP MGSAHPLNAP
YEAFETADGW ITIGAANQTN WLRLLAVLGA EDLAADSRFS ANRDRMANRA ALAEALAPHF
RTAPSADWLA RLEAGGVPAG PVLDVLAMQA DPQTRAREMV VEVEHARAGR MSTLGLPVKF
SATPGRVHGP APMLGEHSRA ILAQAGYDGA AIDDLIARGV VRETTA