Gene Mchl_5101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5101 
Symbol 
ID7118975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5466075 
End bp5467553 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content73% 
IMG OID643527794 
ProductUDP-N-acetylmuramyl-tripeptide synthetase 
Protein accessionYP_002423793 
Protein GI218532977 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.121845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC CGACGCCTGA CGACCGGACT CTCGGCGCGC TGTTCCCGGA GGTGGACGCG 
GCCATCGCCG GCCGCCCCGT CGCGGGCCTC ACCGCCGACA GCCGTAAGGT CGTGCCCGGC
GGCGTGTTCG TCGCGGTACC CGGCACCGCC GCCGATGGCC GGCTCTTCGC CGCCGCCGCA
GCAGCGGCCG GCGCGGTCGC CGTGGCCGGT GAGGGGACGC GCCCGGAAGA TCTGCCCGAG
GCGACGGCCT GGATCGAGGT GGCGGATGCC CGCCGGGCGC TGGCGCTTGC CGCCGCCCGC
CTGTCCGGGC GCCAGCCGGA AACGGTGGTC GCCGTCACCG GCACCAGCGG CAAAAGCTCG
GTCGCCGACT TCGTGCGGCA GATCCTGTCG CGCCTCGGCC GGGACTCGGC GAGTCTCGGC
ACCGTCGGCA TCGTCACCAA CCGGGGCGCG CAATACGGCT CGCTGACGAC CCCGGACCCC
GTCACGCTGC ACGAGACCCT GGCGCGGCTG GCGGACGAGG GCATCACCGA TCTGGCCATG
GAGGCCTCCT CCCACGGCAT CGAGCAGCGC CGCCTCGACG GGGTGGAACT GACGGCCGCC
GCCTTCACCA ATCTCGGCCG CGACCACCTC GATTATCACC CCACCATCGA GGACTATCTG
GACGCCAAGC TCCGCCTGTT CACGACGCTG CTGCCGAAGG GCTGTCCGGC CATCGTCAAC
GCGGACGGTG CCTATGCCGA GCGCGTCATC GGCGTGGCCG ACGCCGCCGG CCACGCTATC
CGCACCACGG GGCGCGGCGG CGACTTCATC CGCCTCGTCG AGGCCGGGAC GGAGGGTTTC
GCGCAGAGCC TGACGCTCTC CCACGCAGGC AAGGACTATC GCGTGCGCCT GCCGCTGGTC
GGTGGCTTTC AGGTCGAGAA CGCTCTGGTC GCGGCGGGTC TCGCCCTGGC GACGCCTGCA
GGTCAGGCCG ATCCGGCCGG CGTCTTCGCG GCGCTCGAAG GGCTCACCGG CGTGCCGGGC
CGCATGGAGC GGATCGGCGA AGCGAACGGG GGCTTGTGCC TCGTCGATTA CGCCCACAAG
CCGGAAGCCC TGGAGCATGT CTTGAGCGCG CTCCGCCCCT TCGCCAGCGG GCGCCTCGTC
GTCGTGTTCG GCTGCGGCGG CAATCGCGAC GCCGGCAAGC GGCCGATCAT GGGCGCCATC
GCCGAACGCC TCGCCGACCG GGTCATCGTC ACCGACGACA ACCCCCGCAA CGAGGAGCCC
GCCGCGATCC GCGCCGCGAT CCTCGCCGCG GCACCGGGCG CGGAGGAGAT CGGCGACCGG
GCCGAAGCAA TCCGCACGGG CGTACGGGAC CTGAGAGCCG GCGACGTGCT GGTGGTGGCC
GGCAAAGGAC ATGAAACCGG CCAGATCGTC GGGCCACGCG TGCTCCCGTT CTCGGATCAC
GACACCCTGC GCGCCGCGAT CGCGGAGTTG AACGGATGA
 
Protein sequence
MSQPTPDDRT LGALFPEVDA AIAGRPVAGL TADSRKVVPG GVFVAVPGTA ADGRLFAAAA 
AAAGAVAVAG EGTRPEDLPE ATAWIEVADA RRALALAAAR LSGRQPETVV AVTGTSGKSS
VADFVRQILS RLGRDSASLG TVGIVTNRGA QYGSLTTPDP VTLHETLARL ADEGITDLAM
EASSHGIEQR RLDGVELTAA AFTNLGRDHL DYHPTIEDYL DAKLRLFTTL LPKGCPAIVN
ADGAYAERVI GVADAAGHAI RTTGRGGDFI RLVEAGTEGF AQSLTLSHAG KDYRVRLPLV
GGFQVENALV AAGLALATPA GQADPAGVFA ALEGLTGVPG RMERIGEANG GLCLVDYAHK
PEALEHVLSA LRPFASGRLV VVFGCGGNRD AGKRPIMGAI AERLADRVIV TDDNPRNEEP
AAIRAAILAA APGAEEIGDR AEAIRTGVRD LRAGDVLVVA GKGHETGQIV GPRVLPFSDH
DTLRAAIAEL NG