| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5085 |
|---|
| Symbol | |
|---|
| ID | 7118959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 5444104 |
|---|
| End bp | 5445042 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643527778 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_002423777 |
|---|
| Protein GI | 218532961 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.144888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGCT TGGCGGGCAA GACCGTCTTC GTCGCCGGAC ATCGCGGCCT CGTCGGCAGC
GCTCTGGTAC GGCGTTTGAA GGGTGAGGAT TGCGAGGTCC TCACCGCGAC GCGGGCGGAA
CTCGACCTGT GCGATCAGGC CGCCGTGCGC GCCTGGATGC GGGACCGGCG GCCGGACGCG
GTGTTCCTGG CCGCGGCCAA GGTCGGCGGG ATTCTGGCCA ACGCGACCTA CCCGGCCGAC
TTCCTCTACG AGAACCTGAT GATCGAGGCC AACGTCATCG AGGCGGCGTT CCGCGAGGAT
GTGGCCAAGC TGCTGTTCCT CGGATCGAGC TGCATCTACC CGAAATTCGC CGAACAGCCG
ATCGTCGAGT CGAGCCTGCT CACCGGATCG CTGGAACCGA CCAACGAGTG GTACGCGATT
GCCAAGATCG CCGGGATCAA GCTGGCCCAG GCCTATCGCC AGCAGCACGG CCGCGACTTC
ATCTCGGCCA TGCCGACCAA CCTCTACGGG CCGGGCGACA ATTTCGACCT CAATTCCAGC
CACGTCCTGC CGGCCCTGAT CCGCAAGGCG CACGAGGCCA AGCGCTCCGG CGCGAAGGAG
ATGGTGATTT GGGGCACCGG TTCGCCGCGT CGTGAGTTCC TGCACGTCGA TGACTGCGCC
GACGCCTGCG TGCACCTGAT GGAGACCTAT TCGGAGGCCG AGCACGTCAA TGTCGGCTCG
GGCGAGGACA TCCCGATCTA CGACCTGACC CGCCTCGTCT GCGACGTCGT CGGGTTCGAG
GGCGAAATCG TCCGCGATCC GAGCAAGCCC GACGGCACCC CGCGCAAGCT GATGTCGGCG
GACAAGCTGC GCGGCCTCGG CTGGGCGCCG AAGGTGCCGC TGCGGGACGG CATCGCCGCG
ACCTATGCGT GGTTCCAGGA GCACGTCGCC CATGGCTGA
|
|---|
| Protein sequence | MHSLAGKTVF VAGHRGLVGS ALVRRLKGED CEVLTATRAE LDLCDQAAVR AWMRDRRPDA
VFLAAAKVGG ILANATYPAD FLYENLMIEA NVIEAAFRED VAKLLFLGSS CIYPKFAEQP
IVESSLLTGS LEPTNEWYAI AKIAGIKLAQ AYRQQHGRDF ISAMPTNLYG PGDNFDLNSS
HVLPALIRKA HEAKRSGAKE MVIWGTGSPR REFLHVDDCA DACVHLMETY SEAEHVNVGS
GEDIPIYDLT RLVCDVVGFE GEIVRDPSKP DGTPRKLMSA DKLRGLGWAP KVPLRDGIAA
TYAWFQEHVA HG
|
|---|
| |