Gene Mchl_5079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5079 
Symbol 
ID7118953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5435710 
End bp5437365 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content71% 
IMG OID643527772 
Productputative monovalent cation/H+ antiporter subunit D 
Protein accessionYP_002423771 
Protein GI218532955 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.793582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC CCCTCCTGAG CGGCCCCGGC GCGGTCCTGT GGTCCGATCA TCTCGTCGTC 
CTGCCGATCG TGCTGCCGAT CGCCGCGGCC GGTGTGATGT TTCTGATGGA CGAGCGGCGC
CACCGCCTGA AGTCGGCGAT CAGTCTCGCC ACCGTGCTGG TGCTGCTCGG CATCGCCCTC
GCCCTCGTCG GCCGGGCGGC CGAGGCGCCT GAGGTCTACC GCCTCGGCAA CTGGGCCGCG
CCTTACGGCA TCGTGCTGGT GGCCGACCGG CTCTCGGCGG TGATGCTGAC CCTGGCCGGC
GTGCTGGGAC TTGCCGCCCT CGTCTTCTCC TTCGCCCGCT GGGGCCGGGC CGGCCCGCGC
TTCCACGGCC TGTTCCTGCT GCTGCTGATG GGGGTGAACG GCGCCTTCCT CACCGGTGAC
GTGTTCAACC TGTTCGTGTT CTTCGAGGTG ATGCTGGCGG CCTCTTACGG CCTCGTCCTG
CATGGCTCGG GCGAGACCCG CATCCGGGCA GGCCTCGGCT ACATCGCCGT CAACCTCGTC
GCTTCGCTGT TCTTCCTCAT CGGTGTCAGC CTGATCTACG GCACGATGGG CACGCTCAAC
ATGGCCGACC TCGCCCGGCG GCTCGCGAGC CCGCCCGCTG AGGCCGCCCT GTTCGAGGTC
GGCTGCGCCG TGCTCGGCAT CGCCTTCCTC ATCAAGTGCA GCGCCTGGCC CCTCGGCTTC
TGGCTGCCGA CCACCTATTC CGCCGCCACC GCCCCCGCGG CGGCGATCCT GGCGATCCTC
AGCAAAGTCG GCGTCTACGT CGTGATCCGC CTCAGCCTGC TCCTGTTCGG GGACGGCAGC
TCGGCAGGGT TCGGCCAGAG CTGGATCCTC GTCACCGGCC TCGCGACCAT CGCCTTCGGC
ACCTTCGGCA TCCTGGCCGC GCGCCATCTG ACGCGGGCAG CGGGCTACGC GGTGATGATC
TCGTCGGGCA CGGTGCTCGC GGCGCTCGGC ACCGGCAGCG CGGCGGCGCT CTCCGGCGCG
CTCTACTACC TCGTCGGCTC GACCTACGCG GCCGGCGCCC TGTTCCTGCT GGCCGAGATC
CTGCAGCGTG CCCGCGACCC GGCGGATGCG GCCCAACCCG TCTTCGCCGA CGAGTACCGC
GATCCCTTCG ACGATGCCGA CGCCGTCGAG GTCGGCCGGG CGATCCCCGC GGCGGTGGCG
ATCCTCAGCA GCGGCTTCCT GCTCTGCACG CTGATGCTCG CCGGAATCCC GCCGCTCTCG
GGCTTCGTCG GCAAGCTGGC GATGTTCTCG GGGCTGGCCT CGAACACCAT GACCGCCTCG
GCCTGGTGGC TGATCGCCGC GCTCACCCTC TCCAGCCTCG GCACCCTGAT TCCCCTTGTG
CGGCTCGGCA TCTTCAGCCT GTGGGTGCCC CATGACGACC CGCCGCCGAC GATGCGGACG
CCGGAACTCG CAAGCCTCAG CGTCCTGCTC GCGGCCTGCA TCGCGCTCGC GCTGTGGGGC
GGGCCGGCGC TCGCCTACAG CGAGGCCACC GTGCGCTGGC TGTCGCAGCC GCAGGACTAC
GTCCGCGCCG TCCTCGATTC GGGCAAAGGT GAAGCGGGCA AGAGCAGCGC AGGCAAAAGC
GGCGCGGGCG AGGGTGCAGT GGGGGCAAGG CCATGA
 
Protein sequence
MNAPLLSGPG AVLWSDHLVV LPIVLPIAAA GVMFLMDERR HRLKSAISLA TVLVLLGIAL 
ALVGRAAEAP EVYRLGNWAA PYGIVLVADR LSAVMLTLAG VLGLAALVFS FARWGRAGPR
FHGLFLLLLM GVNGAFLTGD VFNLFVFFEV MLAASYGLVL HGSGETRIRA GLGYIAVNLV
ASLFFLIGVS LIYGTMGTLN MADLARRLAS PPAEAALFEV GCAVLGIAFL IKCSAWPLGF
WLPTTYSAAT APAAAILAIL SKVGVYVVIR LSLLLFGDGS SAGFGQSWIL VTGLATIAFG
TFGILAARHL TRAAGYAVMI SSGTVLAALG TGSAAALSGA LYYLVGSTYA AGALFLLAEI
LQRARDPADA AQPVFADEYR DPFDDADAVE VGRAIPAAVA ILSSGFLLCT LMLAGIPPLS
GFVGKLAMFS GLASNTMTAS AWWLIAALTL SSLGTLIPLV RLGIFSLWVP HDDPPPTMRT
PELASLSVLL AACIALALWG GPALAYSEAT VRWLSQPQDY VRAVLDSGKG EAGKSSAGKS
GAGEGAVGAR P