Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_5079 |
Symbol | |
ID | 7118953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 5435710 |
End bp | 5437365 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643527772 |
Product | putative monovalent cation/H+ antiporter subunit D |
Protein accession | YP_002423771 |
Protein GI | 218532955 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.793582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCGC CCCTCCTGAG CGGCCCCGGC GCGGTCCTGT GGTCCGATCA TCTCGTCGTC CTGCCGATCG TGCTGCCGAT CGCCGCGGCC GGTGTGATGT TTCTGATGGA CGAGCGGCGC CACCGCCTGA AGTCGGCGAT CAGTCTCGCC ACCGTGCTGG TGCTGCTCGG CATCGCCCTC GCCCTCGTCG GCCGGGCGGC CGAGGCGCCT GAGGTCTACC GCCTCGGCAA CTGGGCCGCG CCTTACGGCA TCGTGCTGGT GGCCGACCGG CTCTCGGCGG TGATGCTGAC CCTGGCCGGC GTGCTGGGAC TTGCCGCCCT CGTCTTCTCC TTCGCCCGCT GGGGCCGGGC CGGCCCGCGC TTCCACGGCC TGTTCCTGCT GCTGCTGATG GGGGTGAACG GCGCCTTCCT CACCGGTGAC GTGTTCAACC TGTTCGTGTT CTTCGAGGTG ATGCTGGCGG CCTCTTACGG CCTCGTCCTG CATGGCTCGG GCGAGACCCG CATCCGGGCA GGCCTCGGCT ACATCGCCGT CAACCTCGTC GCTTCGCTGT TCTTCCTCAT CGGTGTCAGC CTGATCTACG GCACGATGGG CACGCTCAAC ATGGCCGACC TCGCCCGGCG GCTCGCGAGC CCGCCCGCTG AGGCCGCCCT GTTCGAGGTC GGCTGCGCCG TGCTCGGCAT CGCCTTCCTC ATCAAGTGCA GCGCCTGGCC CCTCGGCTTC TGGCTGCCGA CCACCTATTC CGCCGCCACC GCCCCCGCGG CGGCGATCCT GGCGATCCTC AGCAAAGTCG GCGTCTACGT CGTGATCCGC CTCAGCCTGC TCCTGTTCGG GGACGGCAGC TCGGCAGGGT TCGGCCAGAG CTGGATCCTC GTCACCGGCC TCGCGACCAT CGCCTTCGGC ACCTTCGGCA TCCTGGCCGC GCGCCATCTG ACGCGGGCAG CGGGCTACGC GGTGATGATC TCGTCGGGCA CGGTGCTCGC GGCGCTCGGC ACCGGCAGCG CGGCGGCGCT CTCCGGCGCG CTCTACTACC TCGTCGGCTC GACCTACGCG GCCGGCGCCC TGTTCCTGCT GGCCGAGATC CTGCAGCGTG CCCGCGACCC GGCGGATGCG GCCCAACCCG TCTTCGCCGA CGAGTACCGC GATCCCTTCG ACGATGCCGA CGCCGTCGAG GTCGGCCGGG CGATCCCCGC GGCGGTGGCG ATCCTCAGCA GCGGCTTCCT GCTCTGCACG CTGATGCTCG CCGGAATCCC GCCGCTCTCG GGCTTCGTCG GCAAGCTGGC GATGTTCTCG GGGCTGGCCT CGAACACCAT GACCGCCTCG GCCTGGTGGC TGATCGCCGC GCTCACCCTC TCCAGCCTCG GCACCCTGAT TCCCCTTGTG CGGCTCGGCA TCTTCAGCCT GTGGGTGCCC CATGACGACC CGCCGCCGAC GATGCGGACG CCGGAACTCG CAAGCCTCAG CGTCCTGCTC GCGGCCTGCA TCGCGCTCGC GCTGTGGGGC GGGCCGGCGC TCGCCTACAG CGAGGCCACC GTGCGCTGGC TGTCGCAGCC GCAGGACTAC GTCCGCGCCG TCCTCGATTC GGGCAAAGGT GAAGCGGGCA AGAGCAGCGC AGGCAAAAGC GGCGCGGGCG AGGGTGCAGT GGGGGCAAGG CCATGA
|
Protein sequence | MNAPLLSGPG AVLWSDHLVV LPIVLPIAAA GVMFLMDERR HRLKSAISLA TVLVLLGIAL ALVGRAAEAP EVYRLGNWAA PYGIVLVADR LSAVMLTLAG VLGLAALVFS FARWGRAGPR FHGLFLLLLM GVNGAFLTGD VFNLFVFFEV MLAASYGLVL HGSGETRIRA GLGYIAVNLV ASLFFLIGVS LIYGTMGTLN MADLARRLAS PPAEAALFEV GCAVLGIAFL IKCSAWPLGF WLPTTYSAAT APAAAILAIL SKVGVYVVIR LSLLLFGDGS SAGFGQSWIL VTGLATIAFG TFGILAARHL TRAAGYAVMI SSGTVLAALG TGSAAALSGA LYYLVGSTYA AGALFLLAEI LQRARDPADA AQPVFADEYR DPFDDADAVE VGRAIPAAVA ILSSGFLLCT LMLAGIPPLS GFVGKLAMFS GLASNTMTAS AWWLIAALTL SSLGTLIPLV RLGIFSLWVP HDDPPPTMRT PELASLSVLL AACIALALWG GPALAYSEAT VRWLSQPQDY VRAVLDSGKG EAGKSSAGKS GAGEGAVGAR P
|
| |