| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5061 |
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| Symbol | |
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| ID | 7118935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 5414322 |
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| End bp | 5416025 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643527755 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_002423754 |
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| Protein GI | 218532938 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.173185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.490143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGA GCCCAGACGC CGCCCTCCCC GCCCGAAGCC GCGGGCGGAA CGCCGCCCAG
GCGCTCGTGG ATCAGCTCGC GGCCAACGGC GTCACCCACG TCTTCGCGGT GCCGGGCGAG
AGCTACCTGC CGGTGCTCGA TGCGCTCTAC GAATCGGGCA TCGCGCTCAC CGTCTGCCGC
CAGGAGGGCG GCGCGGCGAT GATGGCGGAA GCCCACGGCA AGGCGACGGG GCAACCCGGC
ATCTGCTTCG TCACCCGCGG TCCCGGTGCC ACCAACGCCT CGGCCGGCAT CCACATCGCC
CAGCAGGATT CGACACCGAT GATCCTGTTC GTCGGCCAGA TCGAGCGGGG TCTGCGCGAC
CGCGAGGCGT GGCAGGAGGT CGATTACCGC GCCGCCTTCG GGCCGATCGC GAAATGGGCC
ACCGAGATCG AGACCGGCGC GCGGATGCCG GAATACGTCT CGCGCGCCTT CCACACCGCC
ACCGGCGGTC GGCCGGGTCC GGTGGTGGTA GCGCTGCCGA AAGATATGCT GAAGGACGCC
GCCGAGGGTC CGCTGGCCCC GCCCTTCCAA GCCGTCGAGG CCGCGCCCGG CGCGGAGGAT
CTCGCGTCCC TCGCCGCCCT GCTGGCGGAG GCCAAAAGCC CCTTCCTGGT GCTCGGCGGC
AGCCGCTGGA CCGAGCAGGC CTATGCCGAT ATCCGCCGCT TCACTGAGGC CTTCGATCTG
CCGGTGGCCA CGAGCTACCG CCGCCTGCCG CTGTTCGACC CGCTGCATCC GAACTACGCG
GGCGATCTCG GGCTTGCCGC CAACCCGAAG CTGGTGGCGC GGGCCAAGGC CGCCGACCTG
ATGATCGTGC TCGGCGGCCG CCTCGGCGAG GTCGCGAGCC AGACCTATTC GCTCCTCGAC
ATCCCGGCCC CCCGCACCCG GCTCGTCCAC ATCCATCCCG GAGCGGAGGA ACTCGGTCGG
GTCTACGTTC CGCATCTCGG CATCACCGCC GCGCCCGCCC GGATGGCGGC GGCTCTGGCG
CGGCTCGATG CGCCGGCCTC CGTCCCGTGG GCGGCCGAGA CCCGTGCGGC CCATGACGCA
TATCTGGCGT GGTCGCAGAC CCCGACGCCG CAGCCCGGCC CGGTCAATCT CGGGCAGGTG
ATGGTGCATT TGCGCGAGGC GCTGCCGGAG GACGCGATCC TGTGCAACGG CGCGGGCAAC
TACGCCGCCT GGATCCACCG CTTCTACCGC TTCCGCCGCC TTGCCACCCA CATGGCGCCG
ACCTCCGGCT CGATGGGCTA CGGCGTGCCG GCGGCTGTGG CGATGAAGCG GATCTTTCCC
GACCGCACCG TGATCGCAAT CAACGGCGAC GGCGACTTCC TGATGAACGG CCAGGAATTC
GCGACCGCGG TGCAGTACGG CCTGAACATC GTCTGCATCG TCGCCGACAA TGCGAGCTAC
GGCACGATCC GTATGCATCA GGAGCGCGAT TTTCCGGGCC GCGTCCTTGC CACCGACCTC
GTGAACCCGG ACTTTGCCGC CTACGCCCGC GCTTTCGGCG GCGTCGGCTT CACCGTGGAG
CGGACCGAGG ATTTTCCGGC GGCGTTGGAG GAGGCCCTGG CGGCGCAGCG CCCGGCGATC
ATCCACGTGA AGTTCTCGGT CGATGCGATC ACGCCGGGCC TGAGCCTCAC GGCGATCCGC
GAGAAGGCGC TGGCGGGCGA TTGA
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| Protein sequence | MSQSPDAALP ARSRGRNAAQ ALVDQLAANG VTHVFAVPGE SYLPVLDALY ESGIALTVCR
QEGGAAMMAE AHGKATGQPG ICFVTRGPGA TNASAGIHIA QQDSTPMILF VGQIERGLRD
REAWQEVDYR AAFGPIAKWA TEIETGARMP EYVSRAFHTA TGGRPGPVVV ALPKDMLKDA
AEGPLAPPFQ AVEAAPGAED LASLAALLAE AKSPFLVLGG SRWTEQAYAD IRRFTEAFDL
PVATSYRRLP LFDPLHPNYA GDLGLAANPK LVARAKAADL MIVLGGRLGE VASQTYSLLD
IPAPRTRLVH IHPGAEELGR VYVPHLGITA APARMAAALA RLDAPASVPW AAETRAAHDA
YLAWSQTPTP QPGPVNLGQV MVHLREALPE DAILCNGAGN YAAWIHRFYR FRRLATHMAP
TSGSMGYGVP AAVAMKRIFP DRTVIAINGD GDFLMNGQEF ATAVQYGLNI VCIVADNASY
GTIRMHQERD FPGRVLATDL VNPDFAAYAR AFGGVGFTVE RTEDFPAALE EALAAQRPAI
IHVKFSVDAI TPGLSLTAIR EKALAGD
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