| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5046 |
|---|
| Symbol | |
|---|
| ID | 7113649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 5396852 |
|---|
| End bp | 5397682 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643527740 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_002423739 |
|---|
| Protein GI | 218532923 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.447167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.293877 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACT GGGTCAAAAC GACGTTGCGC CGCGCGCCGG CCCTGCGCGC GCTCGCCCTG
CGCGGGAGCG CCCTGTTCAA GTCGTTGGCC TGCGCCGAGC CCGGTCTCTA CACCCTGTGC
TACCATCAGG TGCCCGAAGC CCAGCAGGAT CGTTTCGCCG CGCAATTGCG CCATCTCGGC
CGGTACGGCG ATTTCATCGA TGCCGACGGG GCCGCCGAGC GTCTCGCCGC GGGCTGGCCG
GCCCGCGACC GCGCCTTCCT CGTCACCTTC GACGACGGCT ATGCCGACAC CTTCGAGGTG
GCGCGTCCGG TTCTGCGGGC CCTGGGCATT CCGGGCATCG TCTTCCTCAT CAGCGACTGG
ATCGACGCGC CGCCGAGCAC GCCGCCCGGC CTCGACCGGG CGACGTCCCT GTCCCCGAGC
GGGCGCCTCT ACATGAGACG GGCCGAGATC GCGGCCTGGT GCGCCGACGG TCTCGACATC
GGATCCCACA CCGCCACCCA CCAGCGCCTG AGCCGGCTCG ACCGCGCCCG GGTCGCCGAC
GAGATCGCCC GCTCCCGGCG CGACCTTGCT GCCCTCACCG GCCGGGAGAT CCGCCATTTC
GCCTGCCCTT GGGGTGTCGC CGGCCACGAT TTCGATCCGG AGCATGACCC GGCGCTGGCC
CTGGAGAGCG GCTACCGGAC CTTCTTCACC ACGCGGCGCG GCCGGGCGCT GAGCGAAGCG
GACCTGCCGG CGATGCCCCG CCACGTGGTC GAGCCGCATT GGCCGGTCTC CGATTTCGAG
GCGCTGATGG GCGGCCGCCG GACGGGATGG CGGGCGCAGG GAACGGCTTG A
|
|---|
| Protein sequence | MKHWVKTTLR RAPALRALAL RGSALFKSLA CAEPGLYTLC YHQVPEAQQD RFAAQLRHLG
RYGDFIDADG AAERLAAGWP ARDRAFLVTF DDGYADTFEV ARPVLRALGI PGIVFLISDW
IDAPPSTPPG LDRATSLSPS GRLYMRRAEI AAWCADGLDI GSHTATHQRL SRLDRARVAD
EIARSRRDLA ALTGREIRHF ACPWGVAGHD FDPEHDPALA LESGYRTFFT TRRGRALSEA
DLPAMPRHVV EPHWPVSDFE ALMGGRRTGW RAQGTA
|
|---|
| |