Gene Mchl_4970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4970 
Symbol 
ID7114967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5309829 
End bp5310863 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content73% 
IMG OID643527663 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002423663 
Protein GI218532847 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0855906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAGGGC AGGGACGAAA AGGTGCTGCG CGGGTTGCCG TGGTCACGGG CGGAAGCGCC 
GGGATCGGTC TCGCCACGGC CCAGCTTCTC GCGCAACGCG GCTGGTCGGT GGCGATCCTG
GCACGCGGTG CCGAGCGTCT CGCCGAGGCC GAGGCGCTGC TCGCCCGCGA GGGTGGGCGC
GTGCTGGCGA TCCCGGCCGA TGTGGCCGAC GCCGCGGTGG TCGAGGCGGC GGCCGACCGG
ATCGAGCGGG AGCTCGGGCC GATCCGGGCC TGGATCAACA ACGCCATGAC GACGATCGTC
AGCCCGGCCG ACCAGGTCAC CCCGGAGGAG TACCGCACCG TCACCGAGGC GACCTATCTC
GGCACCGTCC ACGGCACGCT GGCGGCCCTG CGCCGCATGA ATCCGCGCGA CCGCGGCGTG
ATCGTGCAGG TCTCCTCCGG GCTGGCGATC CGCGCGGCTC CGCTCCAGGC GCCCTATTGC
GCGGCGAAGT TCGCGATCAG CGGCTTCACC GACTCGCTGC GCGCCGAACT GATCCACGAG
AACAGCAAGA TCGCGCTCAG CGTGGTCTAC CTGCCGGCGG TCAACACACC GCAATTCGGC
TGGACCCGCA CCCGGACCGG CCACGGACAG CGCGCCCCCG ATCCCGTCTT CGATCCGCGC
CTGTGCGCGG AGGCGATCCA CCACGCGGCC GAGCGGCCGA CCCGCGAGGT CTGGGTCGGA
CGGACCTCGG TGCTGATGGC GGCGGCCCAG GCCCTCCTGC CGTCCTACGC CGACCGCAAG
GCAGCAGAGA GTTGGGACGA CATGGTGGAG GACGAGGCGG TCCCGGATCG GCGTGGCAAC
CTCGACGCAC CGGCGCCGGG CCCGGCGCGC ATCGATGGCG CCATGAGTGA GCGTGCCAAG
ACGACCCGCT CCGAGTTCTG GACCAGCCGG GAGCGCGATG CCCTCGTGCT CGGTGCCGTG
GGCGCCGCCC TCCTCGGAAC CGCCCTGGCG GCGCGCGCTC TTCGCCGGCC GCTGCGTCTG
CTCGGGCGGC TCTGA
 
Protein sequence
MAGQGRKGAA RVAVVTGGSA GIGLATAQLL AQRGWSVAIL ARGAERLAEA EALLAREGGR 
VLAIPADVAD AAVVEAAADR IERELGPIRA WINNAMTTIV SPADQVTPEE YRTVTEATYL
GTVHGTLAAL RRMNPRDRGV IVQVSSGLAI RAAPLQAPYC AAKFAISGFT DSLRAELIHE
NSKIALSVVY LPAVNTPQFG WTRTRTGHGQ RAPDPVFDPR LCAEAIHHAA ERPTREVWVG
RTSVLMAAAQ ALLPSYADRK AAESWDDMVE DEAVPDRRGN LDAPAPGPAR IDGAMSERAK
TTRSEFWTSR ERDALVLGAV GAALLGTALA ARALRRPLRL LGRL