| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4948 |
|---|
| Symbol | |
|---|
| ID | 7114945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 5281559 |
|---|
| End bp | 5283673 |
|---|
| Gene Length | 2115 bp |
|---|
| Protein Length | 704 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643527641 |
|---|
| Product | ABC transporter domain protein |
|---|
| Protein accession | YP_002423641 |
|---|
| Protein GI | 218532825 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.44049 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGCAT TGAAGAGCAG GCTCGGCATC CAGGCCGTGC TGACGGCGCT CGCCGCCCTC
CTGCTGCTGG CCATGCCGGG GATTCCGAGC CCACCGCTCT ACGTCTCGCT CGCGGGCTTC
GCGATGGCGG GCATCCTCAT CGCCTCGAAC AGCCTCTCGG CCTACCTGAA GATTTTCATC
TCGGTTTACG GCGTCGGCTA CCTGCTGCTG GCGGGCGCCA AGACCCTGGC GGCGATGGGC
GCCCTGCCGG GCGTCGTCGC GGCGCTGCTG CCGCCGGATT TCGCCGCGAC CGGCTCCGTG
GTGTTCGCCG CCATCGTGCT CGCCGTCTCG CACTGGAAGC CGATCCGCGA CATCACCCTG
ATCGCCGATC CCTATTTCGC CAGCCACGAC GCCCCGAGCC GGGAGATCGG CATGTTCCGC
CGGTTCGGCC GCACCGAGGG CCAGATCGGC CGCAACCTCG TGGCGCTGTC GATCTTCGTC
AGCTTCGCGG ACGTGGCGCT GACTCTGCGG TTCAACTTCT TCTACCGCGA CATGTACAAC
GCGCTGCAGG AGTTCGACGC GCCGAGCTTC TGGTATCAGC TCGGCTGGAT CTTCGTGCCG
CTGGCGATCC TCAACGTCGT GATCGGCATG TTCGACATCT ACGTCGATGC CGGATTGCAG
CTCCGCTGGC GCACCTGGCT CACCCACAAT CTCTACGAGC GCTGGCTCGG GGAGGGCACG
CATTACCGCA TCCCCTTCGT CGACGAGCAC GCCGACAACC CGGACCAGCG CATCCAGTCG
GACGTCAACA ACTTCATCGC CCAGACCACG ACCCTCTCGA CCCGGCTGCT CTCGCAGGCG
GCGCAGCTCG TCTCCTTCAT CGTCATCCTG TGGACGCTCT CGCGCGACTT CGTGCTGCCG
TTCACCGACG CCGTGATCCC GGGCTTCCTC GTGTGGCTGG TGATCGCCTA CGCCGTGGTC
GGCACCTGGC TCACGCATCT CATCGGTAAG CCGCTCATCG GCCTCGACTA CCGGCAGGAA
CAGGTCGAGG CGGATTTCCG CTTCGCCCTG GCGCGCAACC GCATCTATTC CGAGCAGATC
GCCCTGCTGC GGGGCGAGCG GGCCGAGGCG TCCCGCCTCG CCACCCTGTT CCACGCCATC
GTCGACAACT ACGTCGGCAT CATCTTCCGG CGCATCAAGC TGATCGCCTT CACCTTCAGC
TACCGCCAGA TGAGCGCGAT CTTCCCGCTC GTCATCGCCG CGCCGTCCTT CTTTGCCAAG
AAGATCACCC TCGGCGCCCT GCAGCAGACC TCGAACGCGT TCAGCAACGT CCAGAACTCG
CTGAACTTCT TCATCAATTC CTACACCATC CTCGCCGCCT ACAAGGCGAA CACCATCCGT
CTCGGCTCGT TCAAGCGGGC GATGACCCAG GCCGAGGCTC TGGCCGGCGC CGGCTACGGC
CTCGCCAACG GCAACGAGAC CGCCGGCGGC GTGACCGCCC GCGACCTGAC GCTGGCGCTG
CCCGATGGCC GCGAGATCGT GCATGCGGGC GCGCTCGAAC TGCCGAAGGG CGGAGCGACC
CTGGTCACCG GCCCCTCGGG CTCGGGCAAG TCGACTCTGT TCCGGGCGAT CGCCGGGATC
TGGCCGTTCG GCAAGGGCCG GGTCGACGTG CCGGCCGGAC AGTCGGCGCT GGTTCTGCCG
CAGCGGCCCT ATCTCCCGCT CGGCTCCTTA CGCGGCGCGG TGGCCTATCC GAACCCGATC
GACCGGTTCT CCGACGAAGA AATGCGCGAC GCACTCAAGG CCGCCCAGCT TCCCCAACTT
GCGGACAAGC TCGACGAGGT CGATAGCTGG GACCGGCGCC TGTCGGGCGG CGAGCAGCAG
CGCCTCGCCA TCGCGCGGGC GATCCTGGCC AAGCCCGACT GGCTGTTCCT CGACGAATCG
ACCGCCGCCC TCGACGAGGA AACCGAGGCC GCGATCTACC GGACGCTGCG CGCGACGATG
CCCGGTACGA CCATCGTCTC GATCGGCCAC CGCTCGACCC TGCACAAGCA CCACGACCGC
CGCGTCGAGA TGAAGCCGAC GGAGGGTGGC CGCTTCGAGC CGCGTCTATC GGCGATGCCA
GCTCCGGCGG AGTAG
|
|---|
| Protein sequence | MAALKSRLGI QAVLTALAAL LLLAMPGIPS PPLYVSLAGF AMAGILIASN SLSAYLKIFI
SVYGVGYLLL AGAKTLAAMG ALPGVVAALL PPDFAATGSV VFAAIVLAVS HWKPIRDITL
IADPYFASHD APSREIGMFR RFGRTEGQIG RNLVALSIFV SFADVALTLR FNFFYRDMYN
ALQEFDAPSF WYQLGWIFVP LAILNVVIGM FDIYVDAGLQ LRWRTWLTHN LYERWLGEGT
HYRIPFVDEH ADNPDQRIQS DVNNFIAQTT TLSTRLLSQA AQLVSFIVIL WTLSRDFVLP
FTDAVIPGFL VWLVIAYAVV GTWLTHLIGK PLIGLDYRQE QVEADFRFAL ARNRIYSEQI
ALLRGERAEA SRLATLFHAI VDNYVGIIFR RIKLIAFTFS YRQMSAIFPL VIAAPSFFAK
KITLGALQQT SNAFSNVQNS LNFFINSYTI LAAYKANTIR LGSFKRAMTQ AEALAGAGYG
LANGNETAGG VTARDLTLAL PDGREIVHAG ALELPKGGAT LVTGPSGSGK STLFRAIAGI
WPFGKGRVDV PAGQSALVLP QRPYLPLGSL RGAVAYPNPI DRFSDEEMRD ALKAAQLPQL
ADKLDEVDSW DRRLSGGEQQ RLAIARAILA KPDWLFLDES TAALDEETEA AIYRTLRATM
PGTTIVSIGH RSTLHKHHDR RVEMKPTEGG RFEPRLSAMP APAE
|
|---|
| |