Gene Mchl_4946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4946 
Symbol 
ID7114943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5280111 
End bp5280590 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content72% 
IMG OID643527639 
Productprotein tyrosine phosphatase 
Protein accessionYP_002423639 
Protein GI218532823 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.565855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGC CTTCCCACCC CGCAATCCTG TTCGTGTGCC TGGGCAACAT CTGCCGTTCG 
CCCCTGGCCG AGGCCGCCTT CCGACAGGAG GCCGAGCGGA TCGGGCTCGA CGTCACGGTC
GATTCCGCCG GCACTGGCGA CTGGCACGTC AGCGAACCGC CGGACCCGCG CGCGATCGCG
GTGGCGCGGG CGAACGGCGT TGATATCGCG GGCTATCGCG GACGTCAGGT CGCGCCGGCC
GATTTCGAGC GCTTCGATCA CGTCGTTGCC CTGGATCTCG CCAACCTCGC ACGGCTGCAG
GCCCTGCGGC CGGACGGGTC GCGGGCCGCG CTGAGCCTGC TCCTCGATCA CGTGCCGGGC
CGGGCGGGCG AGCCCGTGGC CGACCCCTAT TACGGCGCGC AGGAGGGCTT CGACACGACC
TGGGCCGATG TGACCGCAGG CGCCCGAGCC CTCGCCCGCC GGATCGCGGA AGCGGAATGA
 
Protein sequence
MTAPSHPAIL FVCLGNICRS PLAEAAFRQE AERIGLDVTV DSAGTGDWHV SEPPDPRAIA 
VARANGVDIA GYRGRQVAPA DFERFDHVVA LDLANLARLQ ALRPDGSRAA LSLLLDHVPG
RAGEPVADPY YGAQEGFDTT WADVTAGARA LARRIAEAE