Gene Mchl_4926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4926 
Symbol 
ID7114347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5253711 
End bp5254445 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content68% 
IMG OID643527619 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002423619 
Protein GI218532803 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.490233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.751611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAACG ATACCGAAGC GACCCTGGAT CGTCCCGCGA TGACAGACGG CCGTCCCAAA 
CTTTCCGACT CGATCCGCAG CCATCTCGGC GATCATCTGC GCAGCGTGTA CGACACGCTC
GGCGCGGGCG AGGACACACC GTCCCGCTTC TCCGAGTTGA TCGGCAAGCT CGAAGCGGCC
CTCAAGGCGC AGGGCGAGCG GATCGACCCC GAATTCCGCA ACGGCCTGCT CTCCGCGGTG
CCGTCCTTGC GCGCCTTCGC CCTGTCGCTG ACCTCGAACC CGGCGCGCTC CGACGACCTC
GTGCAGGACA CCCTGCTCAA GGGTTGGCAG CACCGTGCTC GCTTCCAGCC GGGCACGAAC
CTCAACGCGT GGCTCTTCAC GATCCTGCGC AACATCTTCT ACTCGGATCA CCGCAAGCGC
GTGCGCGAGG TCGAGGATCA GGACGGCTCC TACGCCGCCC GCCTCGCCAC TGCGCCGCAT
CAGGGCGACC GGCTCGATGT CGAGGATCTG CAGACGGCGC TCGCCAAGTT GCCGCCGGAC
CAGCGCGAGG CCCTCGTGCT GGTGGGCGCC GAGGGGGTCT CCTACGAGGA GGCCGCGACC
ATCATGGGCT GCAAGGTCGG CACGGTGAAG AGCCGCGTCA GCCGCGCCCG CGGCCGTCTC
GCCGAACTCC TCGGGTATGA CGAGGAGGAC CTGTCCTCCG ACCGGCTCAT CCAGTCGGCG
ATGCCCGACG CCTGA
 
Protein sequence
MRNDTEATLD RPAMTDGRPK LSDSIRSHLG DHLRSVYDTL GAGEDTPSRF SELIGKLEAA 
LKAQGERIDP EFRNGLLSAV PSLRAFALSL TSNPARSDDL VQDTLLKGWQ HRARFQPGTN
LNAWLFTILR NIFYSDHRKR VREVEDQDGS YAARLATAPH QGDRLDVEDL QTALAKLPPD
QREALVLVGA EGVSYEEAAT IMGCKVGTVK SRVSRARGRL AELLGYDEED LSSDRLIQSA
MPDA