Gene Mchl_4910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4910 
SymboltrpA 
ID7114331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5232080 
End bp5232922 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content72% 
IMG OID643527603 
Producttryptophan synthase subunit alpha 
Protein accessionYP_002423603 
Protein GI218532787 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0159] Tryptophan synthase alpha chain 
TIGRFAM ID[TIGR00262] tryptophan synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.381713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.738486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC GCATCGATGC CGCCTTCGCC CGCTGCCGCG CGGAAGGACG TGCCGCCCTC 
GTCACCTACG TGATGGCGGG CGATCCCGAT CCGGAGACCT CGCTTAAGGT GCTCGAAGCC
CTACCGAAGG CGGGGGCCGA CATCGTCGAG TTCGGCCTGC CCTTCACCGA TCCCATGGCC
GACGGGCCGG CGATCCAGGC GGCGGGTCTG CGGGCGCTGA AGGCGGGCCA GGATCTGCGC
GGCACCCTCG CCCTCGTCCG CCGCTTCCGC GAAGGCGACG ACCAGACGCC CGTGGTTCTG
ATGGGCTACT ACAACCCGAT CCATACCTAC GGCGTGCCCC ACTTCCTGGA GGATGCGCAG
GCGGCCGGCA TCGACGGTCT GATCGTCGTC GATCTGCCGC CGGAGGAGGA CGAGGAGCTC
TGCCTGCCGG CGCTCGAAAA GGGGCTCGCC TTCATCCGCC TCGCGACCCC GACCACGGAC
GAGGCCCGCC TGCCGGCGGT TCTCGCGAAC ACCGCGGGCT TCGTCTACTA CGTGTCGATC
ACCGGCGTGA CCGGCACGGC GACCCCCGAT TTCGGCCGGG TGTCGCAGGC GGTCAGCCGG
ATCACGGCGC ATACGAACCT GCCCGTCGTC GTCGGCTTCG GCGTGAAGAC CGGCGCGCAC
GCCGCCGAGA TCGCCCGCGG CGCCGACGGC GTGGTGGTGG GCTCGGCCCT CGTCGATGCC
CTGGCCCGCA GCCTCGAACC CGGCGACCGG GCCGGGAGCG GCACGGTGGA GGCGGTCGCC
TCCCTGGTGC GCGAGCTGGC GCAGGGGGTC CGCAGCGCCG CCAAAGCGCC GGCCGGGGCC
TGA
 
Protein sequence
MTARIDAAFA RCRAEGRAAL VTYVMAGDPD PETSLKVLEA LPKAGADIVE FGLPFTDPMA 
DGPAIQAAGL RALKAGQDLR GTLALVRRFR EGDDQTPVVL MGYYNPIHTY GVPHFLEDAQ
AAGIDGLIVV DLPPEEDEEL CLPALEKGLA FIRLATPTTD EARLPAVLAN TAGFVYYVSI
TGVTGTATPD FGRVSQAVSR ITAHTNLPVV VGFGVKTGAH AAEIARGADG VVVGSALVDA
LARSLEPGDR AGSGTVEAVA SLVRELAQGV RSAAKAPAGA