| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4866 |
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| Symbol | |
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| ID | 7114287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 5178762 |
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| End bp | 5180741 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643527559 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_002423559 |
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| Protein GI | 218532743 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0140106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATC TCAACGACCG GCGCCCTCTC GGCCGACGCG GCCCGAGGAT GCAGGTCAAC
CCGCCGGTCT TCTTCACCTC GGCCGGGCTG ACGCTCGCCT TCGCCGGTCT CAGCGCGCTG
TTTCCCGCAC AGGCCAAGTC GATCTTCGAC GGCCTTCAAG CCACGATCGT GCACGAATTC
GGCTGGTTCT ACATCGCCGT CGTCGCCGGC TTTCTCGGCT TCGCGATCTT CCTGATGCTG
AGCCGGTACG GCGACGTGAA GCTGGGGCCG GACGACAGCG AGCCCGACTA CAGCTACCTG
TCGTGGTTCG CGATGCTGTT CAGCGCCGGC ATGGGCATCG GCCTGATCTT CTTCGGTGTG
GCCGAGCCGC TTCAGCACTA TGCCACGCCC CCCGTGGGCG AGGGCAAGAC CATCGAGGCC
GCGCAGCGGG CGATGGTGCT GACCTTCTTC CACTGGGGCG TGCATGCCTG GGCGATCTAC
ATCGTCGTGG GGCTGGCGCT GGCCTATTTC GCGTTCCGTC GCGGGTTGCC GCTGACGGTG
CGCTCGGCCC TCCACCCTCT CATCGGCGAC CGGATCAACG GTCCGATCGG GCACGCGATC
GACATCTTCG CGGTGCTCGG CACGATCTTC GGCGTCGCGA CCTCGCTCGG GCTTGGCGTG
CTTCAAGTCA ATGCCGGTTT CACCCACCTG TTCGGCGTAC CGAACAACAC CTTCGTGCAG
ATCATCCTGA TCGCCGCGAT CACCGGCTGC GCCACGCTCT CGGTCGCCTC GGGGCTGGAC
AAGGGCGTGA AGGTCCTGTC CGAACTGAAC ATCATCCTGG CCGTCGTGCT GCTCGCCTTC
GTGCTGATCA CCGGCTCGAC GGTGTTCCTG CTCCAGGCCT TCGTTCAGAA TCTCGGCGCC
TATCTCGGGG CGGTGGTCGA GCGCACGCTC CAGACCTACG CCTACAAGCC CAACGAATGG
CTCGGCAGTT GGACGCTGTT CTACTGGGGC TGGTGGATCG CGTGGTCGCC CTTCGTCGGC
ATGTTCATCG CCCGGATCTC GCGCGGGCGC ACCATCCGCG AATTCGTCAC CGGCGTGCTG
CTGGTGCCGG TGCTGTTCAC GTTCTTCTGG ATGACCGTGT TCGGCAACAC CGCCATCGAG
ATGGATCGCG CCGGCGCGGT GCCGCTCGCG CAGATCGTCA AGGACAACAT GCCGGTCGCT
CTGTTCGAGA TGCTCGGGCA CCTGCCGTTC GGCATGATCG CCTCGGGGCT GGCGACGCTG
CTGGTGATCT TCTTCTTCGT CACCTCGGCG GATTCCGGGG CGCTGGTGAT CGACATGATC
ACCTCGGGCG CGGCCGACAA TCCGCCGCTC TGGCAGCGGG TGTTCTGGGC GGTCAGCAGC
GGCGCCATCG CCGCCGTGCT GCTGGTGGCG GGCGGCCTGG AGGCGCTTCA GACGGCGGCG
ATCGCCAGCG CCCTGCCCTT CTCCATCGTG ATGATCTTCA TCTGCTACGG CCTGCTCCGG
GCCCTCCAAC TGGAGGGGCG TGCCGGCGGC CTCGACCTGT CCTCGGCCGC TGCCGGGCCG
TCGGGCGGCC TGTCCTGGCA GGAGCGGCTG GCGGCGATCA CCCACTCCTA CCGCAAGGAA
GACCTCAAGA CCTTCCTCGA CGAGACGGTC GCGCCCGCCC TCGAAGCGGT GGCCGGGCAG
ATGCGCGAGA GCGGCTTGTC GCCCGAGGTC GTGCGGTCGG CCGAGCGCAT CGATCTGATC
GTTCCCTACG GGGACCGCGG TGCCTTCCGC TACGGCATCC GCGTGCGCGG ATTGCGGAAT
CCGAGCTTCG CCTGGGCCGA GAACCCGTCG AAGTCGTCGG ATGAGCGCCA CTATCGCGCC
TTCGTCCAGA CCTCCGAGGG CGACCGCCCG CACGACGTCA CCGGCTACGG CCGGGATCGA
GTCATCAACG ATCTCCTGAA GCGCTACGCA CAGTTTCGGG CGGTGCGGGG CACTGCCTGA
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| Protein sequence | MNDLNDRRPL GRRGPRMQVN PPVFFTSAGL TLAFAGLSAL FPAQAKSIFD GLQATIVHEF
GWFYIAVVAG FLGFAIFLML SRYGDVKLGP DDSEPDYSYL SWFAMLFSAG MGIGLIFFGV
AEPLQHYATP PVGEGKTIEA AQRAMVLTFF HWGVHAWAIY IVVGLALAYF AFRRGLPLTV
RSALHPLIGD RINGPIGHAI DIFAVLGTIF GVATSLGLGV LQVNAGFTHL FGVPNNTFVQ
IILIAAITGC ATLSVASGLD KGVKVLSELN IILAVVLLAF VLITGSTVFL LQAFVQNLGA
YLGAVVERTL QTYAYKPNEW LGSWTLFYWG WWIAWSPFVG MFIARISRGR TIREFVTGVL
LVPVLFTFFW MTVFGNTAIE MDRAGAVPLA QIVKDNMPVA LFEMLGHLPF GMIASGLATL
LVIFFFVTSA DSGALVIDMI TSGAADNPPL WQRVFWAVSS GAIAAVLLVA GGLEALQTAA
IASALPFSIV MIFICYGLLR ALQLEGRAGG LDLSSAAAGP SGGLSWQERL AAITHSYRKE
DLKTFLDETV APALEAVAGQ MRESGLSPEV VRSAERIDLI VPYGDRGAFR YGIRVRGLRN
PSFAWAENPS KSSDERHYRA FVQTSEGDRP HDVTGYGRDR VINDLLKRYA QFRAVRGTA
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