Gene Mchl_4848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4848 
Symbol 
ID7118299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5158629 
End bp5159390 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content72% 
IMG OID643527541 
ProductSigma 54 interacting domain protein 
Protein accessionYP_002423542 
Protein GI218532726 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.627338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCC CCATCATCGA CATCCGGGGC TTGAGCCTCG CCTACGAGCG CAACGGGCGG 
CGCACCGAGA TCCTGTCCGC CCTCGATCTC GCGGTGCCGC GGGGGCAGTT CCTCGTCATC
GTCGGCGAAT CGGGCGTCGG CAAATCGACG CTCCTGCGCG TGCTGATCGA TCTGGCCAAA
CCCAGCGGCG GCACGGTTCA TCTCGGCACC GATCCCCAGA AAACCCGCAC GCCGATGGCG
CTGGTGTTCC AGGACGCGCG GCTGCTGCCG TGGCGGCGGG TCATCGACAA CGTCGCTTTC
GGCCTGGAGC GGCACGGCCT GTCGAAGCCC GAGCGCCGCG AGCGGGCGGC GGCGATGCTC
AAGCTCGTCG GGCTGTCCGA CCTCGCCACC CGCTGGCCGC ACCAGCTCTC CGGCGGGCAG
CGCCAGCGCG TCGCCATCGC TCGCGCCCTC GCGGTCGAGC CCGAGGTGCT GCTGATGGAT
GAGCCGTTCT CGGCGCTGGA TAGCTTCACC CGCGAGGGCC TTCAGGACGA GATCCAGCGC
ATCAAGGCGC AGACGGGCAA GACGGTGCTG TTCGTCACCC ACGACATCGA CGAGGCGGTC
TACCTCGCCG ACCGGGTCGT GGTGCTGGCG GGCAGCCCCG GCCGGATCGC GGCGGATGTC
ACCCTCGCGC CGCCCCGCCC GCGCCAGCGC CGGGACGCGG CCCTGGTCGA GGCGGCGCGC
CACCTGCGGG CGGAACTATC GCGGCGCTCG GCGGAACTGT GA
 
Protein sequence
MSGPIIDIRG LSLAYERNGR RTEILSALDL AVPRGQFLVI VGESGVGKST LLRVLIDLAK 
PSGGTVHLGT DPQKTRTPMA LVFQDARLLP WRRVIDNVAF GLERHGLSKP ERRERAAAML
KLVGLSDLAT RWPHQLSGGQ RQRVAIARAL AVEPEVLLMD EPFSALDSFT REGLQDEIQR
IKAQTGKTVL FVTHDIDEAV YLADRVVVLA GSPGRIAADV TLAPPRPRQR RDAALVEAAR
HLRAELSRRS AEL