Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_4812 |
Symbol | |
ID | 7118262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 5112434 |
End bp | 5116705 |
Gene Length | 4272 bp |
Protein Length | 1423 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643527508 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
Protein accession | YP_002423510 |
Protein GI | 218532694 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.330918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCCGT TGCACCCGAA TGAAGTGGAG CGCTTGAAGG CGCTATCTGA ACTGGGTGTA TTCGGCTCTG GTCCGGAGCC GCAGTATGAC GCGATCTGCC GGACGGCTCA GGCACTGTTC GATGTGCCCA TCGCCTACGT TTCGCTCGTT GGCGAGACCG AGCAGCGCTT CAAGGGCAAG TGTGGCCTCG GGGCGGAAGC AACCCCACGT GAGATCTCGT TCTGCACCTA CACCATCCTG TCGCACGAGG TGCTGGTGGT TGAGGACGCC ACACAGGATG AGCGCTTTTC TGCCAACCCG CTCGTCATAG GCAAGCCGCA CATTCGCTTC TATGCCGGTG CACCTCTCGT GCTCAGCTCC GGCATTCACC TCGGCTCGTT GTGCCTTATT GACCGGGTGT CACGCCCCTT CTCAGCCGAA CAGCAGGAGC GGCTACGAGA CCTGGCTCAG ATCGTTGTCG TTCAACTTCG CTTGAGCAAA GCAGAGCGCA ATGCTCGGGA GAGCGCAGCC GACTACCGCC TACTGGCCGA CAACACCAAT GATACGATCA TCCGCTCCGA TCTGGATGGC ACACTCCGCT ACGTCTCGCC AGCGGTCAGC CGGCTTCTTG GCTACGAGCC GCACGAACTC TTCGGCACTC ACCCGCTCGC TTCTGTTCAC CCGGACGAAG CCAGCGGCTA CGGGCAACTG CTGGAGCAGA TCGGGACTGG ACAGATCAGC AAGGCTGTGA CGCAGCAGCG CTACCGCCGC CGAGATGGCA CCTACGTATG GGTGGAGATC TCCTTCAACC TTACTCGCGA GGAGGAATCA GGAGAGCCGA ATGGCTATGT GGCCGTCATA CGTGACGTCT CACAGCGTAA GGCTGCCGAG AGCGAGATGG CGCACATCGC ACGCCATGAT CCGCTTACCG GCCTGCCCAA CCGGCTGCAC TTCCGCGAAC AGCTTGAGCA GGAGATCCGG CGCACGAAGC GGACGGGCAG CACGTTTGCG CTGCTCTGCC TGGATCTTGA CCGTTTCAAG CTCGTCAACG ACAGCCTCGG CCACCAAGCT GGCGACCAAC TGCTGAAGGT CGTGGCGCAG CGGATCAGGT CCGTCCTGCG CACGGAGGAC ACGGTTTCGC GGCTTGGTGG CGACGAGTTT GTCATCATCC AGACCAACTG CGCACGCGCT GAGGATGCGA GCCGGCTTGC AGAGCGATTG ATTGCAGCGA TGTTACCGCC GGTGGACCTT GGCGGCTACC CAGCCGGTAT AGGGGTCAGC ATCGGCATTG CCTTAGCTCC ACGAGACGGT CTGGATCACG ATCACCTCTA CGCACGCGCC GATCAGGCCC TCTACCGCGC CAAGGACGCC GGCCGAAACA CATTCCGGCT CTACGCCGAG GAAGAAGTCG GTTGTAGCCG TATGTTTAAC CAGAGTGGCG AGTGGGAGGT GGGCCAGCCG CTCAGGCAGA TCACGCCAGA CCCGCTGCTG GTAGGCGACC TTTTGCGCGA CATTCTGGAG AGCAGCAGCG ATTGTATGAA GCTGCTCGAT CAGGACGGAA ACCTGCTCTT CCTCAGCGCG GGCGGGCTGA AGGTGATGGA GATCGACGAT GTCCGGCCGT TTCTCGGTCA GTCGTGGGTC GAGTTGTGGC AAGGTGAGCA TCGTGCCGCA GCGAAGAGAG CGGTGGCGCA GGCGAGTCGC GGGCAGGAGG CCCGTTTCCG CGGCTTCTGC CACACGGCTA AAGGTCGGCC GAGATGGTGG GACGTGGCTC TCAGCCGACT TAAGTCTCTG AGCGGCGCGC GCGGTCTGAT CCTGGCCATC TCGCGCGATA TCACGGCACA GGTTGAGCTT GAGAGCGACC TGCAAACCAC AGCGAGCCGC TATAAGGCGC TCATCGAAGC AAGTGCGACC ATGGTCTGGC GGGCAACGTC GGACGGCTCG CTTATCGAGA GCAGCGGGTG GGAAGCCTAC ACGGGTCAGT CGGAGAGCGC CTACAGCGGC CACGGCTGGC TGAACACCGT TCATCCTGAT GATCTGCACC GCGTGACCTC CACGTGGCAC GAGATTTTTG CCTCTCGAAC GGCAGGCTCC TTCGAGTTCC GTGCCCTGTG CGCAGACGGA ACGTACAGGT GGACGCTGAC CAGGGCTACG CCGCTCAAGG ATACCGCTGG TCAGGTCCAG GAGTGGGTCG GAACCGATAG CGACATCCAT GAGAGCAAGC AGGCTACTGA AGCAATCCGC CTTCAGGAAG AACGCTACCG CTTGGCCATG CTCGCCACAC AGGATGCGAT CTGGGATCAC GACATAACAT CGGACACCAT CACGTGGAGC GAGGGCGCTC ACCCGCTGTT CGGCTACTCT GACGCTGGAA TTGCTAGCAC AGGAGCTTGG TGGAGGAGCA AGATCCACCC TGATGATCGA GATCGCGTCA CAGCCTCACT TAAAGAGTTC ATAGACGGTC GAGAGAGCCG CTGGAGCGAG GAGTATCGTT TCGCCCGCGC TGATGGTAGC TACGCGGCGG TAATTGACCG GGGGTTCGTG ATCCGCGACG CTGAGGCGCA AGCCGTGCGC GCGGTCGGAG CGATGCGCGA TATCACCGAG CAGCGACGAG CAGACTCGGC GCTACGCGCC AGCGAGGAGC GCCTGCGGCT TGCCTTGCAT GCCGGTCGGA TGGTTGCATG GGAGCGCAAC CTGAGGACGG GCCGCACCAC TCGATCTGAA AACTCGCTGG ACCTATTCGG TATCGGGTCG GGATCTGCCT CGCAGTTCCT CGACCGCGTT CATCCAGATG ATCGCGGACG TACAGAGCGG CTTGTCCAGC AGGGCAGCCA GAGACGTGAG CAGCGGGAAT TCCGCTATAT CCACCCAGAC GGACGCTTGA TCTGGCTCGC TTCGGCGGTT GAGCGCGTCG ATGCTGACCG CCTCGTCGGC ATCACCTTCG ACATTACCGA GCGTAAGTGC GCTGAAGAGC AGGCCTGGCG CGCAGCCAAT CACGACGCGC TCACTGGCTT GCCGAACCGC CGGCTATTCC GCCAGCGGCT GGAGCAGGCA CTTACTTCTG CCGAGTGCGG CGGCGCGAGT GTGAGCTTGC TTCTGTTAGA CCTCGACCAT TTGCGCGACG TGAACGACAC CCTCGGGCAT GACGCGGGGG ATACTGTGCT AATGGAGGTT GCTCAGCGAT TGCAAGACGG CTTGCGCGCC ACGGACACGG TGGCACGCCT CGGCGGTGAC GAGTTCGCCT TGCTGCTCGC AGAGCCTATG CGCATGGACC AGGCCGTCAT TCATGCAAGA GCGCTCATTG AACGTCTAAG GCAGCCATTC TGCCACCGCG GTCACATGCT CTCCTGCAAA GCCAGCATCG GCCTTGCGGC CTATCCTGAT CACCATCATG AGTCGCACGA ACTCATGAAG GATGCGGACA TCGCGCTCTA CCATGCCAAG GCAAAGGGCC GTAATGGCGT CGTTGTGTTC GCACCGGAGA TGCGGGCAGA GACGGAGCGG CGAGTCCAGA TTGCGTCCGA GGTACAAACC GCGGTTGTGG CGGGCCATAT CGTGCCTTTC TATCAGCCGA AGGTGTGTTT CTCGACCGGA GCGATCGTCG GCTTCGAGGC GCTGGCGCGT TGGCAACATC CTGAAAGAGG GCTGCTCACA CCCGGCTATT TCGGTTCGGC TTTCGATGAT CCAGAGCTTG CAACAGCCAT CGGGGAGTCC ATCCTCCGAC AGGTTGCGTG CGACCTGCGC GAGTGGCAGG AGCGCGGTCT TGCTCCCGGC CGAGTTGCCG TGAATTTTTC CTCGGCAGAG TTCCGCAAGG CTGATCTGGC AGCAACCATC CTGATCGTTT TGGATGAATA CGATGTTCCG GCGAACCTAT TCGAGGTGGA GGTAACCGAG ACGGTATTCC TCGGAAATGG CACCGAGAAC GTGCCTGCTA CCCTCCAACA GCTACAAGAT GCCGGCGTTC TGATAACGCT TGATGATTTC GGCACCGGTT TTGCTTCGCT GACACACCTG AAGCAGTTTC CTGTCGGCCA CCTTAAGGTC GATCAGAGTT TCGTGCGCAA CATGGAGCAG GATAAGGGCG ATGCGGCCAT TGTCGCGGCG GTGGTTGGAC TTGGCCGCAG TCTAGACATG AAGGTTACGG CCGAAGGTGT TGAGACAGCC GGCCAGGCAA TACGCCTCAG GGAGATGGGC TGCGATTACG CTCAGGGTTA CCGCTACAGC AAACCGATGG CCAGCTCTCG CGTGCCCTGG TTCCTGCGGA ACTGGAACAG TGAGGCCGTC AGGAGTAGCT GA
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Protein sequence | MLPLHPNEVE RLKALSELGV FGSGPEPQYD AICRTAQALF DVPIAYVSLV GETEQRFKGK CGLGAEATPR EISFCTYTIL SHEVLVVEDA TQDERFSANP LVIGKPHIRF YAGAPLVLSS GIHLGSLCLI DRVSRPFSAE QQERLRDLAQ IVVVQLRLSK AERNARESAA DYRLLADNTN DTIIRSDLDG TLRYVSPAVS RLLGYEPHEL FGTHPLASVH PDEASGYGQL LEQIGTGQIS KAVTQQRYRR RDGTYVWVEI SFNLTREEES GEPNGYVAVI RDVSQRKAAE SEMAHIARHD PLTGLPNRLH FREQLEQEIR RTKRTGSTFA LLCLDLDRFK LVNDSLGHQA GDQLLKVVAQ RIRSVLRTED TVSRLGGDEF VIIQTNCARA EDASRLAERL IAAMLPPVDL GGYPAGIGVS IGIALAPRDG LDHDHLYARA DQALYRAKDA GRNTFRLYAE EEVGCSRMFN QSGEWEVGQP LRQITPDPLL VGDLLRDILE SSSDCMKLLD QDGNLLFLSA GGLKVMEIDD VRPFLGQSWV ELWQGEHRAA AKRAVAQASR GQEARFRGFC HTAKGRPRWW DVALSRLKSL SGARGLILAI SRDITAQVEL ESDLQTTASR YKALIEASAT MVWRATSDGS LIESSGWEAY TGQSESAYSG HGWLNTVHPD DLHRVTSTWH EIFASRTAGS FEFRALCADG TYRWTLTRAT PLKDTAGQVQ EWVGTDSDIH ESKQATEAIR LQEERYRLAM LATQDAIWDH DITSDTITWS EGAHPLFGYS DAGIASTGAW WRSKIHPDDR DRVTASLKEF IDGRESRWSE EYRFARADGS YAAVIDRGFV IRDAEAQAVR AVGAMRDITE QRRADSALRA SEERLRLALH AGRMVAWERN LRTGRTTRSE NSLDLFGIGS GSASQFLDRV HPDDRGRTER LVQQGSQRRE QREFRYIHPD GRLIWLASAV ERVDADRLVG ITFDITERKC AEEQAWRAAN HDALTGLPNR RLFRQRLEQA LTSAECGGAS VSLLLLDLDH LRDVNDTLGH DAGDTVLMEV AQRLQDGLRA TDTVARLGGD EFALLLAEPM RMDQAVIHAR ALIERLRQPF CHRGHMLSCK ASIGLAAYPD HHHESHELMK DADIALYHAK AKGRNGVVVF APEMRAETER RVQIASEVQT AVVAGHIVPF YQPKVCFSTG AIVGFEALAR WQHPERGLLT PGYFGSAFDD PELATAIGES ILRQVACDLR EWQERGLAPG RVAVNFSSAE FRKADLAATI LIVLDEYDVP ANLFEVEVTE TVFLGNGTEN VPATLQQLQD AGVLITLDDF GTGFASLTHL KQFPVGHLKV DQSFVRNMEQ DKGDAAIVAA VVGLGRSLDM KVTAEGVETA GQAIRLREMG CDYAQGYRYS KPMASSRVPW FLRNWNSEAV RSS
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