| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4789 |
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| Symbol | |
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| ID | 7118239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | - |
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| Start bp | 5077244 |
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| End bp | 5079631 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643527488 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(s) |
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| Protein accession | YP_002423490 |
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| Protein GI | 218532674 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0663494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCCG TCGTCGGTTG TCTCATCGAT GCCCATGACT TCCGGCTCGT CGTGCTGGCG
GCCGGGATCT GCGCCCTCTC GGCGCTGACC ACGGTCTGCA TCGTCAGCCA CGCGCGTCGG
GCGGAGGGTT GGGCCCAGAC CAGTTGGCTC ACCGTGGCGG CGACGGCCGG CGGCTCTGGC
ATCTGGGCGA CCCACTTCAT TGCCATGCTG GCCTTCGCGC CGGGCGTCCC GAGCGGCTAC
GACGTCGCGC TCACCGGCCT GTCCCTCGTC ATCTCCGTCG CCTTCGCTGG CTCAGGCCTC
TCGCTCGCGG TCCTCGTCGG CGGCAAGGTC GCGGCGTGGG TCGGAGGAGC GGTGCTCGGG
TTCGGCATCG CGGCGATGCA CTACACCGGC ATGGCCGCCT ACGACGTCGC CGGCCACAAG
GCGTGGGACC CGGCCACCGT CGGTGTCTCG CTCGCGCTCG GCGGGCTGCT GGGCGGCGCC
GCGCTGGCGG CGCAGGTGGG CGCCCGTGGC CTCGGGCGCC AACTGCCCAC GGCCCTCCTG
CTCCTGCTCG CCATCTGCAG CCACCACTTC ACCGCCATGG GAGCCGTCAC GGTCACGCCC
GACCCAGCCG TCGCTGTCTC GGAATCCGCC GTCCCGAACG CCTGGCTCGC CGTCGCCGTG
GCTCTCGCGA GCTTCGCCAT CCTGCTCCTC GCCGGAGCCG CCCTGGCGTT GGACGCGCGC
GACCGCCGCC ATGCTAAGCT GGAAGCCGAC CGGCTCCACA GCCTCGCCAA CGCCGCCGTC
GAAGGCCTCG TCGTCTGCAC CGGGGACACC ATCGTCAGCG CCAACCGCAG CTTCGCAAAG
CTCGTCGGCC TGCCGCAAGC CGCACTCGCG GGTACGGCCC TGTCGGCGTA CCTGCCCGGC
GACGCGACGC GGCTCGCCTT AGCCAGCCAG CCCGAGCGAC CGGTCGAGGC CGAGCTCCGC
CAGGCAGACG GGACGCTGGT GCCGGTCGAG GTCATCATGC AGCCGGTCGA ACACGCGGGG
CGGCCGCACT ACGCCGTCGC CATCCGCGAT CTGCAGGCGC GGCGCCAAGC CGAGAGCCAG
ATCCAGTTCC TCGCCCACCA CGACGCGCTC ACGGGGCTGG CCAATCGCAC CAGCTTCAGC
AAGCGTCTCG ACCAGGAGAT GCGCGCCGCC GATGTGGGCG GGCGCAAGCT CGCGGTGCTC
TGCCTCGACC TCGACCGCTT CAAGGAGGTC AACGACCTGT TCGGCCACGC CGCCGGCGAC
GCCATGCTGG AGAGCGTTGC CCACATCGTC TCGGCCGAGC TCGACGACTC CCAGATGATG
GCCCGGCTCG GCGGCGACGA GTTCGCGGTC CTGATGCCTT GCGCCGGGCC GTCCGAGGCC
GGCCGGCTCG CCGAGCGCAT CCTGGAGGCG CTGCGCTCCG GCAGGGTCGA GGCAGGCGGT
CCGCAGATCG CGACCAGCAT CGGCGTTGCC CTCTACCCGG ATGACGCACG GGAACGTGCG
GCCCTCCTGA GTAACGCCGA CACAGCGCTC TACCGGGCCA AGTCGGAAGG GCGCGGCACC
TACCGTTTCT TCGAGGCGAA GATGGGCACC GAGGTACGGG AGCGCCGCCT GCTGGAGCAC
GACCTGCGCC ACGCCGTGGC GCGGGGTGAG ATGCACCTCG TCTACCAGCC GCAGACCGAT
GTCAGCTTGG GCGCCGTCAT CGGCTTCGAG GCGCTGCTGC GCTGGAAGCA CCCGGAGCGC
GGCTACGTCT CGCCGGCGGT GTTCATTCCC ATCGCCGAGG AGAGCGATGC CATCCTGCAG
ATCGGCGAGT GGGTGCTGCG CGAGGCCTGC CGCGAGGCGG CAAGCTGGCC GAACCCGTTG
TCCATCGCGG TCAACGTTTC GGCAGTGCAG ATCCACAGTC CGCACTTCGT CGGCCTCGTG
CACGAGGTGC TGCTCAGGAC CGGGCTGGCG CCGGACCGGC TGGAGGTCGA GGTGACCGAG
ACCGCCCTCA TCAACGACCC GAACCGGGCG CTCTTGACGC TACGGCAGTT GAAGGCGCTG
GGGCTGCGCA TCGCCATGGA CGACTTCGGC ACTGGCTACT CGTCCCTATC GAACCTGCGC
TCGTTCCCCT TTGACAAGAT CAAGATCGAC CAGTCGTTCG TGCGCTCGGT CGACAGCAAC
GAGCAGACGG CGGCCATTGT GCGCTCTGTG CTGGGCCTCG GTCGCGGGCT CGGGCTGCCG
GTCCTGGCCG AGGGCGTCGA GACTGACGCC GAACTCAGCT TCCTAGTAGC CGAGCAGTGC
CACGCGGCGC AGGGCTACCT GATGGGCCGG CCGTCACCCA TCGACCGGTT CACCCAGCAC
ACGCATGGAA CCGCCCGGCC CAACCCCGGC GAGCGGAAAC GCGCCTGA
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| Protein sequence | MLAVVGCLID AHDFRLVVLA AGICALSALT TVCIVSHARR AEGWAQTSWL TVAATAGGSG
IWATHFIAML AFAPGVPSGY DVALTGLSLV ISVAFAGSGL SLAVLVGGKV AAWVGGAVLG
FGIAAMHYTG MAAYDVAGHK AWDPATVGVS LALGGLLGGA ALAAQVGARG LGRQLPTALL
LLLAICSHHF TAMGAVTVTP DPAVAVSESA VPNAWLAVAV ALASFAILLL AGAALALDAR
DRRHAKLEAD RLHSLANAAV EGLVVCTGDT IVSANRSFAK LVGLPQAALA GTALSAYLPG
DATRLALASQ PERPVEAELR QADGTLVPVE VIMQPVEHAG RPHYAVAIRD LQARRQAESQ
IQFLAHHDAL TGLANRTSFS KRLDQEMRAA DVGGRKLAVL CLDLDRFKEV NDLFGHAAGD
AMLESVAHIV SAELDDSQMM ARLGGDEFAV LMPCAGPSEA GRLAERILEA LRSGRVEAGG
PQIATSIGVA LYPDDARERA ALLSNADTAL YRAKSEGRGT YRFFEAKMGT EVRERRLLEH
DLRHAVARGE MHLVYQPQTD VSLGAVIGFE ALLRWKHPER GYVSPAVFIP IAEESDAILQ
IGEWVLREAC REAASWPNPL SIAVNVSAVQ IHSPHFVGLV HEVLLRTGLA PDRLEVEVTE
TALINDPNRA LLTLRQLKAL GLRIAMDDFG TGYSSLSNLR SFPFDKIKID QSFVRSVDSN
EQTAAIVRSV LGLGRGLGLP VLAEGVETDA ELSFLVAEQC HAAQGYLMGR PSPIDRFTQH
THGTARPNPG ERKRA
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