| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4744 |
|---|
| Symbol | |
|---|
| ID | 7118110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 5029905 |
|---|
| End bp | 5035538 |
|---|
| Gene Length | 5634 bp |
|---|
| Protein Length | 1877 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643527443 |
|---|
| Product | putative superfamily I DNA and RNA helicase protein |
|---|
| Protein accession | YP_002423446 |
|---|
| Protein GI | 218532630 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.994907 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGAA CGGCATCGGC TGTGCAGGAT GATAGCTCCG GGTCAGTCTT CCAGTCGGAT
CTGCCTGTAG ACGCCAAGGT CGAGCGCGCG CGCGCCGAAC TCCTCGACCT CTCTGCGCGC
AACCGCCTGC TCAATATTCC GCGCTCAGCC AAGAGCGTGA AATCCCTCGA GATTGTCGAC
GAGAAGGCGT CCGAGGTGTT CAGGATGCTC TTGCGCGAGG GCAAGACCTT CACCTTTCTG
CCCGGCCGCG TCAGCCGGGT GAAGGCTGGG CAGGAATCTC CCGAAACCGT AGAGCCCGAA
GCCGCAGATG CAGAAGCCGA GCCGGAGGAG ATCGATGCAC TCCCCCAGCC TGAGGCCGAC
TCGCTCAACG ATCGGGGCGT TTACGGCCGC CATGCCGACA CCAAACTCCA GACCCGTCTG
ACCTCAGAAG GGCTGCAGAA GCGTCTGCTC GACCTCTACG TCGATGCGCG TACGCTCGAG
GAGGAGCAGG GCGTTAATGT CCTCTACCTC GCGCTCGGCA CGCTGAAGTG GATCGACCCC
AACAACGCTG CCAACGTCCG GTATGCGCCG CTGACCCTGC TACCGGTCAG GCTCGAGCGC
GGGTCGGCCG CCGAGCGCTT CCGCTTGCGC TGGCGCGGCG AAGAGCAAGC CCCGAACCTC
TCGCTCGAAG CCTATCTCGA GCGCGTTCAT ACGATCCGCC TGCCCGGGAT GGAGCTTGGC
GAGGAGTTCG ACCCAACGGC CTACGCCGCC GACGTGGCGC AGGCCGTCGC TCTGAAGCCT
GGCTGGGAAG TCTTGCCCGA CGACATCGTG CTCGGGTTTT TCTCCTTCGC GAAGTTCCTG
ATGTACCGCG ACCTCGACCC GGCTAACTGG CCGGCGGGCG CCCGCTTTAC GGATCGAGCG
ACGATCCGCG CGCTGCTGTC CGACGGTTTC CCGCCGGTCG ACGACCTCAT CGGCGAGGAC
GCCGCGATTG ACCCGCACAT CGGGCCGGCC GAGCAACTTC ACATCGTCGA CTGCGACAGT
TCGCAGTCGG TGGCGGTGCA CGAGGTGCGG CGCGGTCGCG ACCTCGTCAT CCAGGGGCCG
CCTGGCACCG GCAAGTCGCA GACGATCGCC AACATCATCG CGGCCGCAAT CGCCGACGGG
CGCAGCGTGC TGTTCGTGGC CGAGAAGATG GCCGCGCTTG AGGTGGTCAA GCGGCGCCTC
GACCGTGCGG GGGTGGGCGA TGCCTGCCTT GAGCTGCACT CCAACAAGGC TAACAAACGC
GCGCTGCTCG ACGAGCTGCG CCGCACCTGG GAGCTCGGCG CGCCCCGATC CGGCACCGAG
ACGAGTCTCA TCACCCGGCT AACCGAGGCG CGCGACGCGC TGAACGCCCA TCCAGCGCGG
CTCCATCAGC AGCATGCCCC CTCAGGCCTC ACGCCGTACC AAGTCATCGG ACACCTCACG
CGGCTGCGCC AGGATGGCGA GCGCCCGACG AACCTCGAGC TGCCCGCGGC GCCATCCTGG
GACGCGGACG GGGTGCGGCA GCGCGACGAT CTGCTGACCG AGCTCGCCCA GCGCGTCGCC
GACATCGGCC GGCCAGACGA TCACCCCTGG CGCGGTGTGG GGCTTGAGGC GATCCTGCCG
ACCGATGTCG AGCGGCTGAA GCTCCGCCTT GCCGACCTGC AGGTAGCCCT GGGGGCGGCG
CAGGCCGAGG CCGAAGCAGT CGGGGCTTCA CTCGGCCGAC CGGAGTTCGC GTCCCTCGGC
GACCTCGAAC TCGCCGCCGC GCTGGCCGAG CGCTTCGCCG GAGCGCCGAC GATTCTTGGC
GACGCAGCCC TCGGCTGCGA TGCGTGGGCC TCGCACCGGC CTGAGATCGC CGCGCTGCTC
GAGCGTGGGG GCGCCTACGC CGCACTCGTC GCCGAACTGT CCGGGGCGGT GCGGGCGGAG
GCCTATGCGA TCGACGTCGC GGGCCTGCGC ACCGGGCTCG AGACACTGCC GAGAACCTTC
CCGGCCGAGG GATTTGCTCG CGCGGCCGCG CTCGAGACGC AGGTCCCGCG TGTGCTGGCC
GCTGCACGCG ATCTGAGGGG GCGTCTCGGG TCGGCGGCTT CGGTCGAAAC CCTGAGTGAC
GTCGAGCGCC TCGTGACCAC CGCGCGGCGT GTCGCGGACG CCCCAGACGC GAGCCCTGAG
GCCTTCGCCG CAACTGTGTG GGAGCGCGGG GTCGATCAGG CGGGAGATCT CGCTGAAGCG
GCGGCTCAGC TGGCCCAGGC GAGAGCAGCG ACCGCGGGCG TCCTGACGGA GGCTGCCTGG
ACGACGGAAC TCGCGTCGGC GCGTCAAGTC CTGGCAGCCA AGGGGACGAG TTTCACCCGG
TTCTTGTCAG GTGAGTGGCG CGCGGCCAAC CGCCTCGTGA AGACGGTGCT CGCGGCCCCT
ACTACCCCAC TGCCCGCGGT ACTCGCCGCC GTCGACGCAC TTCAGGCTGG CAAAGCGGCG
ATCGCCCTCC TGCAAGCCGA GGATGCCTTC GGGCGGGCGG CCTTCGGCAC CGACTGGCGG
GCTGAGCGCT CCCGGCCTGA GCCACTGCAA GCCCTCGTTG CCTGGATGCG CAGCCTGCGC
GGCCTGGGCG CCGAACCGCG CCTGATCGCG AGCCGTCTAC CCGATCGCGC CGATCTCGAG
GCGCGGGCCT CTGCCCTCGC GCGGCTGTGC GAGGTGCTCG GTCCGATCGC GTCCGTCCAC
TGGGCGGATC TCGGCGACGC GAATGAAGCA GCTTTCCCCA GCGTAGTGAA CGTCAATCAA
GTGCCGCTCG CGCGCCTGGC CGATCGTGCG GGGGCCATCG CTTCCCTCGA CGCGGGCTGT
CGCGCCGTGA TGATCGAGAC GGACACGCCC GTACCCCAGC GCCTCGCCGT GCTGGCGCGC
CTGACCGCCG CACAGGATGC CGGCGACGCG CTCGAAGCAG CCGACGCACT CGGTCGCACC
GCATTCGGTC TGGCTTGGCG CGCCTCTGCC TCCGACTGGC CAGCCCTCAG GTCCGCTGCA
GAATGGGTCA CGGACAACGC CGATATTCGC GTGCAGTCCG CACGCGTCTC AGACCGGGTG
GCGCTGGCCA AGCGAGCGGA GGCAGCCGCG GCTGAGGCCA GACGCTTGAC CACTGACCTC
GACGCGCTCT TCGCGGATCT GAGGCTCGAG GTCGTTGCTC GGTTCACCCA CCCGGGTGCA
GGCACGATCC CAACAGAGAC TTTACGCTCC GCTGTTGCGC GCTGGGGCAC GGAGATCGAG
GGGCTCTCGA AGTGGGTAGC CTACCGCGAA CGTGCCAACC GGGCCCGGGA TCTTGGACTC
GGAGAGTTGG TCGACCGGCT GGCGGATGGG CGTCTCGCAC CGAACACCGC CCGGCCGGCT
TTCGAGATGG CGTACTTCGA GGCGCTGTTT CGTGCACTCA CTAAAGCCGA CCCCGCGCTC
GCGCGCTTCG ACGGCGAACT GCACGGACGA CTGGCCACGC AGTTTGCCGA CCTCGACCGG
CAGCGCATCG CCCTGGCGAG CGTCGAGGTC GCCCGCGCCC ACCACCGGCG TATCCCGAAG
GTCGCGGGCG GACTCGGGCC ACTCGGCGTG CTCAGGGCCG AGATGGCGCG CAAGCGTGGC
CACATGCCGA TCCGCCAGCT CATGCAGCGC GCCGCCCCGG CGATCCAGGC GCTCAAGCCC
GTCCTGATGA TGAGCCCACT CTCGGTGGCA CAGTTCCTGC CGCCAGGGGT AATCGAGTTC
GACCTCCTCG TGATGGACGA GGCGAGTCAG ATCCAGCCGG TCGACGCGCT GGGCGCCATC
GCACGCGCGC GCCAGGTCGT TGTGGTCGGT GACGAGAAGC AGCTGCCACC CACCCGCTTC
TTCGCCAAAA TGACTGGAGG GACAAGCGAC GAGGACGACG ACGGCACCGC GCAGGTCGCT
GACGTCGAGA GCGTGCTCGG CCTATTCACC GCTCGCGGCC TGCCGCAGCG CATGCTGCGC
TGGCACTATC GCAGCCGGCA CCAGTCCCTG ATCGCCGTCT CGAATAGCCA GTTCTACGAG
AACAAGCTGT TCATCGTGCC GAGCCCCTAC ACCGGCGAGG CCGGGATGGG CCTGCGCTTC
CACGCAGTGG CCAGCGGGGT GTTCGACAGC GGCAACACCG GCACCAACCC GGTCGAGGCG
AAGGCTGTGG CCGAGGCCGT GCTTCGGCAC GCGCTGACCC ACCCGAACCT CAGCCTGGGC
GTCGTGGCGT TCTCGGTTAA GCAGCGCCGC GCCATCCAAG ACGAGGTCGA GCGTCTGCGC
CGGCTCAACC CCGAGACGGA GCCCTTCTTC CAAGACCATC CGAGCGAGCC GTTCTTCGTC
AAAAACCTCG AGAACGTGCA GGGCGATGAG CGCGACGTCG TGATGATTTC GGTCGGCTAC
GGGCGCAACG CGCAAGGGTA CATGGCGATG CGCTTCGGGC CCTTGAGCGC GGAGGGGGGC
GAGCGGCGCC TTAACGTTCT GATCAGCCGG GCCAAGCGCC GCTGCGAGGT CTACGCCTCG
ATCACCGACG AGGACATCGA CCTCGAGCGC GCCAAGGGCA AAGGTGTGCT GGCCTTCAAG
CTGTTTCTGC ACTTCGCCCG CACGGGGCGG CTCGGCATCG CGCAGACGAC AGGGCGCGAC
CACGAGAGCG TGTTTGAGGC ACAGGTCGCG CGCGCTCTGC AGGCCCGCGG CTATCACGTC
CACCCACAGG TCGGTCTGGC GGGCTTCTTC ATCGACCTCG CTATCGCCGA TCCTGAGCGG
CCCGGCCGCT ACCTCATCGG CATCGAGTGC GATGGGGCAG CCTACCACGC ATCCCGATCG
GCGCGCGACC GCGACCGGCT GCGCCAGGCC GTGCTCGAAG ACCATGGCTG GATCATTCAC
CGGATCTGGA GCACCGACTG GTTCCAGCGC CCCGAGGAAC AGCTCGAGCG GACGATCGCG
GCGATTGAGG CGGCCAAGGT CGAACTCGAC GCGCGCATGG AGTTCGGCGG GGCCCGCGCG
CGAGCCGTTC CGGTCGAGGT CGTGACAATC GAGCGGGCCG ACGTCGTCGA GGTCGGCCTG
AGCGAGCGCT CGGACGACCA ACCGAGCCGC CTCTACGTCG AGCTGGTGCC CAACGCCCCG
CGCGGCCAGC CCGAACTGCA TGAGACGCCG ACAGGACTGC TCGCTGGCCT CGTCGAGCAG
GTCGTGGCGG TCGAGGGCCC AGTGCACATC GATGAGGTGA CCGCTCGCGT GCGTCAGGCC
TGGGGCCTGC AGCGCAGCGG TCCGCGCATC CAGGCGGCGG TCGAGCGCGG CGTCGAGGCG
GCTCGCGCCC GCGGGGGAAT CGAGCGGGAC GGACCGTTCC TCGCGCTGCC GAGCCAAGCG
ATCACCGTGC GCGACCGGAG CCTGGCGGGA TCCGGCACGC TGCGCCGGCC GGAGATGCTG
CCGCCGACCG AGCTGCGCGT AGCGATCCAA GAGGTCGTGG CGGGGAGTTT CGGGGCGACC
GCCGAGGAGA TCGTCCCGGC GGTCGCGCGG ATGCTCGGGT TCAAGGCGAC GAGCGCGCAG
CTGCGCGACG TCATCGGAAC GCAGATCGAG GGGCTGACGC GGGACGGCGC GCTGACCGCG
CAGGGCTCAC TGCTGACGAT GGCGAGCCCA TCGCAGGTAT CGCAGACGGT CTGA
|
|---|
| Protein sequence | MAGTASAVQD DSSGSVFQSD LPVDAKVERA RAELLDLSAR NRLLNIPRSA KSVKSLEIVD
EKASEVFRML LREGKTFTFL PGRVSRVKAG QESPETVEPE AADAEAEPEE IDALPQPEAD
SLNDRGVYGR HADTKLQTRL TSEGLQKRLL DLYVDARTLE EEQGVNVLYL ALGTLKWIDP
NNAANVRYAP LTLLPVRLER GSAAERFRLR WRGEEQAPNL SLEAYLERVH TIRLPGMELG
EEFDPTAYAA DVAQAVALKP GWEVLPDDIV LGFFSFAKFL MYRDLDPANW PAGARFTDRA
TIRALLSDGF PPVDDLIGED AAIDPHIGPA EQLHIVDCDS SQSVAVHEVR RGRDLVIQGP
PGTGKSQTIA NIIAAAIADG RSVLFVAEKM AALEVVKRRL DRAGVGDACL ELHSNKANKR
ALLDELRRTW ELGAPRSGTE TSLITRLTEA RDALNAHPAR LHQQHAPSGL TPYQVIGHLT
RLRQDGERPT NLELPAAPSW DADGVRQRDD LLTELAQRVA DIGRPDDHPW RGVGLEAILP
TDVERLKLRL ADLQVALGAA QAEAEAVGAS LGRPEFASLG DLELAAALAE RFAGAPTILG
DAALGCDAWA SHRPEIAALL ERGGAYAALV AELSGAVRAE AYAIDVAGLR TGLETLPRTF
PAEGFARAAA LETQVPRVLA AARDLRGRLG SAASVETLSD VERLVTTARR VADAPDASPE
AFAATVWERG VDQAGDLAEA AAQLAQARAA TAGVLTEAAW TTELASARQV LAAKGTSFTR
FLSGEWRAAN RLVKTVLAAP TTPLPAVLAA VDALQAGKAA IALLQAEDAF GRAAFGTDWR
AERSRPEPLQ ALVAWMRSLR GLGAEPRLIA SRLPDRADLE ARASALARLC EVLGPIASVH
WADLGDANEA AFPSVVNVNQ VPLARLADRA GAIASLDAGC RAVMIETDTP VPQRLAVLAR
LTAAQDAGDA LEAADALGRT AFGLAWRASA SDWPALRSAA EWVTDNADIR VQSARVSDRV
ALAKRAEAAA AEARRLTTDL DALFADLRLE VVARFTHPGA GTIPTETLRS AVARWGTEIE
GLSKWVAYRE RANRARDLGL GELVDRLADG RLAPNTARPA FEMAYFEALF RALTKADPAL
ARFDGELHGR LATQFADLDR QRIALASVEV ARAHHRRIPK VAGGLGPLGV LRAEMARKRG
HMPIRQLMQR AAPAIQALKP VLMMSPLSVA QFLPPGVIEF DLLVMDEASQ IQPVDALGAI
ARARQVVVVG DEKQLPPTRF FAKMTGGTSD EDDDGTAQVA DVESVLGLFT ARGLPQRMLR
WHYRSRHQSL IAVSNSQFYE NKLFIVPSPY TGEAGMGLRF HAVASGVFDS GNTGTNPVEA
KAVAEAVLRH ALTHPNLSLG VVAFSVKQRR AIQDEVERLR RLNPETEPFF QDHPSEPFFV
KNLENVQGDE RDVVMISVGY GRNAQGYMAM RFGPLSAEGG ERRLNVLISR AKRRCEVYAS
ITDEDIDLER AKGKGVLAFK LFLHFARTGR LGIAQTTGRD HESVFEAQVA RALQARGYHV
HPQVGLAGFF IDLAIADPER PGRYLIGIEC DGAAYHASRS ARDRDRLRQA VLEDHGWIIH
RIWSTDWFQR PEEQLERTIA AIEAAKVELD ARMEFGGARA RAVPVEVVTI ERADVVEVGL
SERSDDQPSR LYVELVPNAP RGQPELHETP TGLLAGLVEQ VVAVEGPVHI DEVTARVRQA
WGLQRSGPRI QAAVERGVEA ARARGGIERD GPFLALPSQA ITVRDRSLAG SGTLRRPEML
PPTELRVAIQ EVVAGSFGAT AEEIVPAVAR MLGFKATSAQ LRDVIGTQIE GLTRDGALTA
QGSLLTMASP SQVSQTV
|
|---|
| |