Gene Mchl_4616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4616 
Symbol 
ID7117779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4891748 
End bp4892752 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content72% 
IMG OID643527314 
Productphage SPO1 DNA polymerase-related protein 
Protein accessionYP_002423318 
Protein GI218532502 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.259396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.244304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAA ACCACGCGGA TACCGACGCC AGAGGCGACC TGATCTCCTA CCTCGACTTC 
CATGTCGCGG CAGGCGTCGA CGCGGTCCTC GACGAGCAGC CCCACGACCG CTTCGCCGAG
GCCGAGTCCG TTCGGGCTGA CGCCGCCTCG CAGGCCGAGC CGGCCACGCG CCGCGAGCCC
CTAGAATCAC GCCGCGAGCC TCTTGAACCA CGCCGTGAGC CCCTCCCGCC ACGCCGTGAG
GCCCTCGAAC CGCGCAGCGA GCCGCCGCAG CGTGACGCCC CCTCCGCGGA AGAGCCGCCC
CTGGCGTTCC GGCGTGAGCT GCCGAGCCGC GACGCACCCG CGCGCGAGCC CCCCCGCACC
TATGGCAACG CGGCCGGCGC CAAGCCCGGC GAGGCGGCGG ACGACGCGCG GGCACGGGCC
GCGCAGATGA AGACCCTCGA CGAACTGGAA GAGCTGCTGC GCGGCTTCGA GGGCTGCGGC
CTGCGCTTCA CCGCCAAGAA CCTCGTCTTC GCCGACGGCA ATCCGCAGGC GCGGGTGATG
TTCGTCGGCG AGGCGCCGGG GGCCGACGAG GACCGGATCG GCAAGCCGTT CATGGGACGC
TCCGGCCAGC TTCTCGACCG GATGATGGCG GCGATCGGTC TCGACCGAAC GAGCGCCTAC
ATCTCCAACG TCGTGCCCTG GCGCCCGCCG GGCAACCGCA ACCCGACCCC GCAGGAGATC
TCGATCTGCC GCCCCTTCGT CGAGCGCCAG ATCGAACTCG CCAACCCCGA CATCCTCGTC
TGTCTCGGCG CGCCCGCGAC GCAGACGCTG ACCGGCACCA AGGACGGCAT CCTCAAGGCA
CGCGGACGCT TCTACCCGTA TCGCCTTGGC GACGGCCGCG AGATCCGGGC GCTCGCCACC
CTCCATCCTG CCTACCTGCT GCGCCAGCCG GTGCAGAAGC GCCTCGCTTG GCGCGACTTC
CGGATGCTGA AGAGTGCCCT CGACGGGAGC GCCGCGGGCA AGTAG
 
Protein sequence
MTANHADTDA RGDLISYLDF HVAAGVDAVL DEQPHDRFAE AESVRADAAS QAEPATRREP 
LESRREPLEP RREPLPPRRE ALEPRSEPPQ RDAPSAEEPP LAFRRELPSR DAPAREPPRT
YGNAAGAKPG EAADDARARA AQMKTLDELE ELLRGFEGCG LRFTAKNLVF ADGNPQARVM
FVGEAPGADE DRIGKPFMGR SGQLLDRMMA AIGLDRTSAY ISNVVPWRPP GNRNPTPQEI
SICRPFVERQ IELANPDILV CLGAPATQTL TGTKDGILKA RGRFYPYRLG DGREIRALAT
LHPAYLLRQP VQKRLAWRDF RMLKSALDGS AAGK