| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4584 |
|---|
| Symbol | |
|---|
| ID | 7117980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 4857808 |
|---|
| End bp | 4859766 |
|---|
| Gene Length | 1959 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643527283 |
|---|
| Product | protein of unknown function UPF0118 |
|---|
| Protein accession | YP_002423287 |
|---|
| Protein GI | 218532471 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.113593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.096848 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG ATCCGGTCAC CACGCGGCTC CTGCGGCAGG CGCTGCCGGT GGTGACGACG
CTCGCCTCGA TGCTGCTGGT CGTGACGCTC GCGGGCGCGC TGTATTTCGG CCGCGACATC
CTCGTGCCGG TGGCGCTCGC CATCCTGCTG AGCTTCGTCC TCGTGCCCGC CGTGCGGGCC
CTGCGGCGCG TCCGGGTGCC GCGGGTGGCG GCGGTGCTGC TGGTGGTGGT GCTCGCGTTC
GGCCTGCTCG GCGCGATCGG CAGCCTGATC GCCCGCGAGG CGGCGCAGCT CGCGACCGAT
CTGCCGCGCT ACTCGCTGAC CCTGCGCGAC AAGATCACGG CCCTGCGCGC CGCCACCGCC
GAGCGCGGAA GCCTGTCGGA CACCTTCTCC GGCTTCTTCG ACATGGCCGA GGAGATCGGC
AAGGAGTTGC AGCCGCCCGC CGCCAAGACC GAGTCCGAGA CGAACGCGCC GCTCGGCACG
GCGGAGCGGC CGATGCAGGT CGAGATCCAC GCTCCCCGCA CCGGGCTGCT GACGACGCTC
GGCAGCGTGG CGGGCGGGGT GCTGCACCCG CTGGCGACGC TCGGCTTGAT CCTGCTGTTC
ACGATCTTCA TCCTGCTCCA GCGCGAGGAT CTGCGAAACC GCGCGATCCG GCTCGCGGGA
TCGAGCGATC TGCGCCGCAC CACCGCGGCG ATCGACGACG CCACGAGCCG GCTCAGCCGG
TTCTTCGTGG CGCAGCTCAT CCTCAACGTC GCCTTCGGCC TCGTGATCGG CGTGGGCCTG
TGGTTCATCG GCGTGCCGAG CCCGATCCTG TTCGGCGTTA TCGCCGGCAT CTCGCGCTTC
GTGCCCTATG TCGGCGCGGT GCTCTCGGCG GCGCTGCCGC TCGCCATCGC CGTGGCCGTC
GATCCCGGCT GGTCGATGGC GATCCAAGTC GCGATCCTGT TCGTCGTGAT CGAGCCGATC
GCCGGCCACG TGGTCGAACC GCTGCTCTAC GGGCACTCGA CCGGCATCTC GCCGATTGCG
GTGATCCTCG CGGCGACGAT CTGGACCTTC CTGTGGGGGC CGATCGGCCT CCTGCTCGCC
ACCCCGCTGA CCGTCTGCCT CGTAGTGCTC GGCCGCCATG TCGAGCGGCT GTGGTTCCTC
GACGTGATCC TCGGCGACCG CCCGGCGCTC GGCCCCCAGG AGATCTTCTA CCAGCGCATG
CTGGCGGGCG ATCCGGCCGA GGCCGTCGAT CAGGGGCGGC TGTTCCTGAA GGAGCGGGCG
CTCGTGACCT ACTACGACGA GGTCGTGCTT CCGGGCCTGC GCATGGCCCA GGAAGATGCG
GCGCGCGGCA TGCTCGACCG GGAGCGGCAG GGCGAGGTCG GCGCCGGCTT CCGCACGGTG
GTCGAGGCGC TGGGGCTGGC GCGCAAGCGC GGCATGCCGC GGCGCTCGCG CAAGCCCATC
GGGGCCGAGG CCGAGGCCGC CTTCGCCGCG GTGGGGCCGG ACCGGCACAC CGCCGGCATC
GTGCTCGGCC CGGACGACTT GGCTTCGGCC TGGCGCGGCG AGGCGCCGGT CCTGTGCGTG
CCGAGCGGGG GCGCCTTCGA CGAGGCCGCG ACGCTGATGC TCGCTCAGAC GCTCTCCCGC
CACGGGCTCG GAGCGCGGGT GGCGCCGGGC GACGCGTTGC GGAACGGTCT GCCCGAGGGC
GAGCGCCCGG CGATGATCTG CTTCTCCTAT CTCGACCCGA TCAGCCTGTC GCAGATCCGC
CTGACCATCC GTCGCGCCCG CAAGGCCGCG CCGGGAGTGA CGATCCTCGT CGGCTTCTGG
CGCGAGCGCG ACCCGGCCTC CCTCGGCCGC CTGCGCCGGG CGATCTCCGC CGACCTGCTC
GTGACCTCGC TGAGCGACGC CCTCGACGCC GCACTGGCGC GGGCGCGGGC CGGGACAGCC
GCTCCGGCCT CGCCCCGGCT TCGGCAGGCG GCGGAGTAG
|
|---|
| Protein sequence | MTTDPVTTRL LRQALPVVTT LASMLLVVTL AGALYFGRDI LVPVALAILL SFVLVPAVRA
LRRVRVPRVA AVLLVVVLAF GLLGAIGSLI AREAAQLATD LPRYSLTLRD KITALRAATA
ERGSLSDTFS GFFDMAEEIG KELQPPAAKT ESETNAPLGT AERPMQVEIH APRTGLLTTL
GSVAGGVLHP LATLGLILLF TIFILLQRED LRNRAIRLAG SSDLRRTTAA IDDATSRLSR
FFVAQLILNV AFGLVIGVGL WFIGVPSPIL FGVIAGISRF VPYVGAVLSA ALPLAIAVAV
DPGWSMAIQV AILFVVIEPI AGHVVEPLLY GHSTGISPIA VILAATIWTF LWGPIGLLLA
TPLTVCLVVL GRHVERLWFL DVILGDRPAL GPQEIFYQRM LAGDPAEAVD QGRLFLKERA
LVTYYDEVVL PGLRMAQEDA ARGMLDRERQ GEVGAGFRTV VEALGLARKR GMPRRSRKPI
GAEAEAAFAA VGPDRHTAGI VLGPDDLASA WRGEAPVLCV PSGGAFDEAA TLMLAQTLSR
HGLGARVAPG DALRNGLPEG ERPAMICFSY LDPISLSQIR LTIRRARKAA PGVTILVGFW
RERDPASLGR LRRAISADLL VTSLSDALDA ALARARAGTA APASPRLRQA AE
|
|---|
| |