| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4562 |
|---|
| Symbol | |
|---|
| ID | 7117957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 4830008 |
|---|
| End bp | 4830742 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643527261 |
|---|
| Product | dTMP kinase |
|---|
| Protein accession | YP_002423266 |
|---|
| Protein GI | 218532450 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0125] Thymidylate kinase |
|---|
| TIGRFAM ID | [TIGR00041] thymidylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0973906 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGCG ATGCGCCGCG GGGCGTCTTC ATCACCTTCG AGGGCGGGGA GGGGGCGGGC
AAGTCCACCC AGATCGCGCG CTTGGCCGAG ACCCTGCGCA GGGTGAGCGG GCGCGAAGTC
GTGACCACCC GCGAGCCCGG CGGGACGGAA CGGGCGGAAG CCCTGCGTGC GGCTTTGCTG
CGGGGCGTGG CCAAGCCCTA CGGGCCCTTC GCCGAAGCGC TGATGTTCGC CGCCGCCCGC
ATCGACCACA TCGAGAACTT GATCCGCCCG GCCCTGGACC GCGGCGCGAT CGTACTGTGC
GACCGCTTCT CCGACTCGAC CCGCGCCTAT CAGGGCGCGG CCGGCGGCCT GGATCCGGCG
CTGATCGACA GCCTGGAGCG GGTAACGCTC GTGGATTTGC GCCCCGACCT TACCCTGATC
CTCGATCTGC CGCCCGAGGC CGGCCTCGCC CGGGCGCGGC GGCGCGGGGC GGGCGAACCC
GCCGACCGCT TCGAAGCCGA GGGCATGCGT TTCCACGAGC GGCTGCGGAC GGCCTTCCGC
AGCATCGCCG AGGCCGAGCC GGAGCGCTGC CGCGTCATCG ACGCGGATCT CGGCCCCGAT
GCGGTCGAGA CCGCCATCGC CACCGCCATC GCCGCCCGAT GGCCGGATCT GCTGCCCCCC
GCGGGAGAAG GGCAGGGGCA AGAGGGTAAG AACCGGGAGG GCAAGGACCG GGAAGGACAA
GGTCATGCGG CCTGA
|
|---|
| Protein sequence | MSSDAPRGVF ITFEGGEGAG KSTQIARLAE TLRRVSGREV VTTREPGGTE RAEALRAALL
RGVAKPYGPF AEALMFAAAR IDHIENLIRP ALDRGAIVLC DRFSDSTRAY QGAAGGLDPA
LIDSLERVTL VDLRPDLTLI LDLPPEAGLA RARRRGAGEP ADRFEAEGMR FHERLRTAFR
SIAEAEPERC RVIDADLGPD AVETAIATAI AARWPDLLPP AGEGQGQEGK NREGKDREGQ
GHAA
|
|---|
| |