Gene Mchl_4542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4542 
Symbol 
ID7118507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4811776 
End bp4813584 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content73% 
IMG OID643527241 
Productglycosyl transferase family 39 
Protein accessionYP_002423246 
Protein GI218532430 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0207348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTGCC TTGGCATCGC GCCGCCCGCG CTGTCACGGG CGGAGGATGG CTGGCCGCTC 
GTCGGCGCGC TGCGCCTTGG CGATCGGGTG CTGTCCTTCG GGGCCGCGAG CCATCTCCGC
GCCTGCCTCC TGCTCCTGCT GATCGGTCTC GCCAGCTTCC TGCCGGGCCT TGCCTCGCTC
CAGCCGATGG ACCGGGACGA GCCGCGCTTT GCCCAAGCCT CCAAGCAGAT GCTGGAGACG
GGCGACCTCG TCGATATCCG CTTCCAGGCC GAGGCCCGCC ACAAGAAGCC GGTCGGGATC
TACTGGGCCC AGGCCGCCGC CGTCGCGGCC GGCGAGGCGC TCGGTGTGCC GCAGGCGCGC
ACGCAGATCG GGCTCTACCG GATCCCCTCG CTTCTCGGCG CGCTGGCGGC GATCCTGCTG
ACCTACTGGG CGGGCCTCGC CCTGCTCGAC CGTCGCCGGG CGCTGCTGGC CGCCGCCCTG
TTTTCCGCCT GCATCATGCT CTCGGCGGAA GCGCGCCTTG CCAAGACCGA CGCGCTGCTC
ACCGCCTGCT CGGTCGCCGC GTTTGGCGCG CTCGCCCGCG CCTGGCTCGG GCGCGCCCGG
TTGGAGCGGC GCCGCGGCCC GGCCTCGCTC GGAACGGCCT TGGTCTTCTG GCTCGGGATC
GCCCTCGGCA TCCTCGTGAA GGGGCCGATG GTGCCGCTCT TCGCCGGGCT CGCCGCCTTC
GTGCTGTGCC TGCGCGAGGG CTCGGCCCGC TGGCTGCTCG ACCTGCGCCC GCGCTTAGGC
CTCCTCATCA CGCTCGCCGT CGTGGCGCCC TGGTTCCTGG CGATCGCCTG GAAGAGCGGC
GGCGCCTTCT TCGGCGAGGC GGTGGGGCGC GACATGCTCG GCAAGGTCGG CACCGGCGCC
GAGAAGCATT GGGGCCCGCC CGGCGCCTAC GCGCTGGCCT TCTTCGCCAC CTTCTGGCCG
GGCGCCGCCT TCGCCGCCCT CAGCCTTCCC TTCGCCTGGG CGCGGCGGGG CGAGGAGGCG
GTGGCGCTGC TGCTCGCCTG GATCGTGCCG ATGTGGCTGA TCTTCGAGGC GGTGCCGACC
AAGCTGCCGC ATTACGTCCT CCCCCTGATG CCGGCGGTGG CGATTCTCAC CGTGCTGGCG
CTGTCGCGCG GCGCGCTCGA TCCGCGCCGT CCGGGCGCGC GCTGGGTGGC GGGGCTCGTC
GTGCTGATTC CGGTCGGGCT GACGCTGGGC CTCAGCCTTG CTGCGTGGCG TCTCGACCAT
GTGCTGCCCC TGGCCGCCCT GCCGCTGCTG CTCGCCGCTT GCATTCTCGC CGGCCTCGCT
TGGGCCGCCT TCGCCCGCGG GGCGAGAGAA GGGGCGGAGC AAAGGGCGGG GCAAGAGACA
CGGCCAGAGG CAGGGGAGGG CGCTCTGGTG CTCGCCGTCG CCGCCTCGGT GGTACTGTCG
GGCGCCGTGT TCGGCCTGAC CCAGCCGGTG CTGCAAAGCC TCAAGGTCTC GCCGCGGCTC
GCTGCGATCC GCGATGCCCT GCCCTGCGAG GCCCCGCGTG TGGCAAGCCT CGGCCTTCGC
GAGCCGAGCC TCGTCTTCAC CGTCGGCACG GATCTGGCCA TGCTGAATTC GGGTGCGGAG
GCCATCGCCT TCCTACGGGA GGGCGGCTGC CGCCTCGTGC TGGTCGAGGA CCGGTTCGCC
GCCGAATTCA CGGCGGCCGA AGGCGGGCAA CCGCTTAGCC CCGTCGGCCG GGTCACCGGC
TTCAACATCA ACGGCGGCAA GCCGGTCGGG GTCTCCGCCT ACGCCGCGCT GCCGGGTTCC
ACGCCATGA
 
Protein sequence
MTCLGIAPPA LSRAEDGWPL VGALRLGDRV LSFGAASHLR ACLLLLLIGL ASFLPGLASL 
QPMDRDEPRF AQASKQMLET GDLVDIRFQA EARHKKPVGI YWAQAAAVAA GEALGVPQAR
TQIGLYRIPS LLGALAAILL TYWAGLALLD RRRALLAAAL FSACIMLSAE ARLAKTDALL
TACSVAAFGA LARAWLGRAR LERRRGPASL GTALVFWLGI ALGILVKGPM VPLFAGLAAF
VLCLREGSAR WLLDLRPRLG LLITLAVVAP WFLAIAWKSG GAFFGEAVGR DMLGKVGTGA
EKHWGPPGAY ALAFFATFWP GAAFAALSLP FAWARRGEEA VALLLAWIVP MWLIFEAVPT
KLPHYVLPLM PAVAILTVLA LSRGALDPRR PGARWVAGLV VLIPVGLTLG LSLAAWRLDH
VLPLAALPLL LAACILAGLA WAAFARGARE GAEQRAGQET RPEAGEGALV LAVAASVVLS
GAVFGLTQPV LQSLKVSPRL AAIRDALPCE APRVASLGLR EPSLVFTVGT DLAMLNSGAE
AIAFLREGGC RLVLVEDRFA AEFTAAEGGQ PLSPVGRVTG FNINGGKPVG VSAYAALPGS
TP