Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_4478 |
Symbol | |
ID | 7118443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 4739962 |
End bp | 4741689 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643527177 |
Product | circadian clock protein KaiC |
Protein accession | YP_002423182 |
Protein GI | 218532366 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | [TIGR02655] circadian clock protein KaiC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.79331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCGTCTG AATCCGCGAG CCCGCCCGAA GGCACTTCCA AGGACGCTTC GAAGAGCGCT CCCGCGCTCG CGAAGGTCGC CACCGGCATC GACGGCTTCG ATACCATCAC CTTCGGCGGC CTGCCGAAGG GGCGGCCCTC GCTAGTCTGC GGCGCGGCCG GCTGCGGCAA GACGTTGTTC GCCACCACCT TTCTCGTCAA CGGTGCGACC CGCTTCGGCG AGCCCGGCGT GTTCATGAGC TTCGAGGAGC GCGCCGAGGA TCTCGTCGCC AACGTCGCCT CCCTCGGCTA CGACCTCGAC GGGCTGGTGG CGCAGGGCAA GCTCGCCATC GACCACGTCC GCGTGGAGCG CAGCGAGATC GAGGAGACCG GCGAGTACGA CCTCGAAGGG CTGTTCATCC GCCTCGGCTT CGCGGTGGAT TCGATCGGCG CCAAGCGCAT CGTGCTCGAC ACGATCGAGA CCCTGTTCGC GGGCTTTTCC GACGAAACGG TGCTGCGGGC CGAACTCCGC CGCCTGTTCG GCTGGATCAA GGACCGGGGC CTGACCGCGA TCATCACCGG CGAGCGCGGC GACGGCCAGC TCACCCGCCA GGGGATGGAG GAATACGTCT CCGACTGCGT GGTGCTGCTC GACAACCGCG TCGAGGACCA GATCACGACG CGGCGCCTGC GCGTGGTGAA GTATCGCGGC TCGGCCCACG GCACCAACGA GTACCCGTTC CTGATCGATG CCGAGGGCAT CAGCGTCCTG CCGGTCACGG CGGCCGACCT CGACTACACC ATCGCCGAGG GCGTGGCCTC CACCGGCATC CCCGGCCTCG ACGCGATGCT CGAACCCGGC GGCTTCCACC GCGGCACCAG CATCCTCGTG TCGGGCGAGT CCGGCACCGG CAAGACCATG ATCACGTCGA GCATGATCGC CGCGGCCTGC GCGCGCGGCG AGCGCTGCAT GTCCTTCGTG TTCGAGGAGA GCGGCGACCA GATCATCCGC AACGCCCGCT CGATCGGCCT CGACCTCGCC CGCCATGTCG AGGCGGGCCT GCTGCGCTTC GAGGCGGCGC GTCCGAGCCT CTACGGCCTG GAGATGCATC TGGCGCGCAT GCACCGGGAC ATCGACCGCT TCGCGCCCAC CGTGGTGGTG GTCGATCCGC TCTCGGCCCT GCGCGGCCCG CCGGCCGAGC TTCAGGCGAC GATGCTGCGC ATGGTCGACA TGCTGAAGAG CCGCGGCATC ACCGCGGTGT TCACGAGCCT GCGCGAGGAT GGCAGCCTCG ACCACGACAG CAATATCGGC GTCTCCTCGC TGATGGATGC CTGGATCAAG CTCCTCAACA TCGAGGCCAA CGGCGAGCGC TCGCGCACGC TCTACGTCAT CAAGGCCCGC GGCATGCGCC ACTCGAACCA AGTGCGCGAG TTCAGCATGT CGGGCGACGG CATCGCCCTC GTCGAGGCCT ATATCGGCCC GGCGGGCGTG CTGACGGGCA CCGCCCGCGT CGTGCAGGAG GCGGAGGAAG CCGCCGCCGT TCTGCGCCGC GAGCAGGAGA GCCGCCGACG GCGGCGCGAG GCGGAGCGGC GGCGCCAGTC GCTGGAGCGC CAGATCGACG AACTGCGCGC CACCCTGGAA GCCGCGGCAG AGGAAGAGGC GGTGCTGTTG AGCGAGGATG AGATGCGCGA GGCGATGCTG ACGAGCGAGC GGCGCATCCT CTCCACCCGC CGGGGAGGCA CGCGATGA
|
Protein sequence | MASESASPPE GTSKDASKSA PALAKVATGI DGFDTITFGG LPKGRPSLVC GAAGCGKTLF ATTFLVNGAT RFGEPGVFMS FEERAEDLVA NVASLGYDLD GLVAQGKLAI DHVRVERSEI EETGEYDLEG LFIRLGFAVD SIGAKRIVLD TIETLFAGFS DETVLRAELR RLFGWIKDRG LTAIITGERG DGQLTRQGME EYVSDCVVLL DNRVEDQITT RRLRVVKYRG SAHGTNEYPF LIDAEGISVL PVTAADLDYT IAEGVASTGI PGLDAMLEPG GFHRGTSILV SGESGTGKTM ITSSMIAAAC ARGERCMSFV FEESGDQIIR NARSIGLDLA RHVEAGLLRF EAARPSLYGL EMHLARMHRD IDRFAPTVVV VDPLSALRGP PAELQATMLR MVDMLKSRGI TAVFTSLRED GSLDHDSNIG VSSLMDAWIK LLNIEANGER SRTLYVIKAR GMRHSNQVRE FSMSGDGIAL VEAYIGPAGV LTGTARVVQE AEEAAAVLRR EQESRRRRRE AERRRQSLER QIDELRATLE AAAEEEAVLL SEDEMREAML TSERRILSTR RGGTR
|
| |