Gene Mchl_4449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4449 
Symbol 
ID7117763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4707718 
End bp4710345 
Gene Length2628 bp 
Protein Length875 aa 
Translation table11 
GC content71% 
IMG OID643527148 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_002423153 
Protein GI218532337 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR02373] photoactive yellow protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGATC CGTCGCAGAT GCATGCCGTG GGGCCGAACG GTGGTCCGGT CGACCTTCCG 
GTCGATCTCG ATGCCTTGAC CGCCGAGCAG CGGGATGAAT TCGGCGTGGG CATTCTTGCC
CTCGACGCCG CCGGAATCGT GCTCGCCTGC AATCGGGCCG CGGGCGCGCT GTGCGGCCTG
CCGCCCAATA CGATGATCGG GCGGAGTTTC TTCCGCGAAC TCGTGCCGAG TGCCAACGTG
CCGAGCTTCT ACGGCCGCTT TCTCAGCGGC CAGCGCCGGA GCGTGGCCGA TCAGGCCTTC
GAGTTCGTGT TCGGCCGCAT CCCGGCCCCC CTGCGGGCGC GAATCGGCCT GCGATCCGGG
GCGAACGGGC ACATCTGGCT GACGATCACC CCCCTGGAGC AGATCGCCGC CGGCCCGTCG
CGCGAGGCCG TCCTCGCGGC GATCGCCCAG CGCAGCCGGG CCGAGCCGGT CGATCCGAGC
CTGTGCGAGC GTGAGCCGAT CCACATTCCC GGTTCGATCC AGCCGAACGC GGTGATGCTC
GCCGCCGACG CCGCGAGCCT CGAGATCCTG GCCTTCAGCG CCAACGCCGC CGACGTGCTG
GCGCCCGATC TCTTCCCGCC CAACGGCCTC AACCTGGAGG CGGTGCTGCC GGGCGCGATC
GTCTCCGCGA TCCGCGACGG GCTCGCCGCC CACACCCTGA CCGACGGGCG GCTCCTGCGC
CGCTCGCTCA CGCTTCCGCC GCGGGGGGAG CGCTTCCACC TCGTGGCCCA TGCCCATCTC
GGCCGGGTGA TCGTCGAGCT GGAACTGGCG CCGGAGCGCC CCGAGGACTT CCTCGCCGCG
AGCCCGCTCG ACGCCGAACT CGCCATGATG CGGCTGCGCG CCGCCGAGTC CCTGACCGAG
GCGGCGCAGA TCGCCGCTCT CGAAATCCGC GCCATGACCG GTTTCGAATC GGTGCTGGTC
TACCGTTTCG ACACGGATTG GAACGGCGAG GCCATCGCCG AGGACATGGT GCCGGACTGG
CAGCGCCCGC TGATCGGCCT GCGCTTTCCC GCCTCCGACA TCCCGGCCCA GGCCCGCGCC
CTCTACACCA AGGCCAAGAG CCGCTTCGTG ATCGACCGCG ACTGCGTGCC CGTGCCGCTG
GTGGCCGACC GCGCCGCGGG CAACGCGCCG ATCGACCTCA CCTTCGCGCA GAACCGGACG
CTCTCGCCGA TCCACCTCGA ATACCAGCGC AATCTCGGCG TCGACGGCTC GATGTCGATC
TCGATCATGG TCGAGAACCG GCTCTGGGGC CTGATGATCG GCCATCACCG CCGGCCGCAC
TACGTCGCGC CGGAGACCCG CGCCGCGGCG ACCGTGCTCA CCGACGCCTT CGCCATGCGG
GTGCAGGAGA TCGAAGGCAA GGCGCTCTGG GGCGAGCGGC AGCGCCATCT CGACGTGCAG
GGCCGGCTGG TGCGCGGGCT CACCCGTTCC GACGATTTCG TCACCTCCCT GACCCAGGGC
GATCCGACCC TGCTCGACCT GTTCGGCGCC ACGGGCGCGG GCATCGTCTC GGACGAGGCC
GTCTGCCTCG TCGGCGTCAC GCCGGAGGCG GCCAAGGTGC GGGCGCTCGC CGATTGGCTG
CGAGAGAGCC TGCCGCCCAA CGAGACCACC TTCGTCACCG ACACGCTGGT GCTGCATCAC
GCGCCGGCCG CGGACTTCAC GGAGATCGCC AGCGGGCTGC TCGCGGCCTT CGTCGGCACC
TCGCGCCAGC ATCTGCTGTT CTGGGTCAAG CCGGAGGTGC CGAGCACGGT GACCTGGGGC
GGCGATCCGC GCAAACCCGT CCTGCCCGGC AGCGGCCCGG TGGCGGTGCT GCCGCGGCGC
TCGTTCGAGC GCTGGATCGA GGAGCGCCGT GGCCATTCCA CCCCCTGGGC GACGTGGAAG
GTGGCGCTCG CCGCGCAGCT CGCCGACGCC GTGGACGGCG TGGTGCTGCG CCAGCGCCGC
AAGATCGACG AGCTGACGGG GCTGCTCGCC GACAAGGAGC GCCTGCTGGA GCAGAAGGAT
CTGCTCACCC GCGAGATCGA CCACCGGGTG AAGAACTCGC TGCAGATCGT GACGGCCTTC
CTGCACATGC AGCGCCGGCA GATCGCCGAT CCGGAGGCGC GCCAAGCCTT CTCCGAGACC
TCGGCCCGCG TCATGAGCGT CGCGCGGGTG CATGACAGCC TGTACCAGGG CGAGAGCATG
GAGCAGGTCG ATCTCGGCCA GACCATCCAG ACCCTGTGCA GCGACCTCGC CGGTATGGCC
GGCGATGAGC ACAGCGTCGA GCTGACCGCC GAGCCCGGCC TGATGGTGCC CTATCGGCAC
GCGGTGGCGC TCTCGCTGAT CACCACCGAA CTCGTCACCA ACGCATTCAA ATATGCCGGC
AAGCCCGAGA AGGGAGCGCG GATCAGCGTC TCCGTGGCCG GCGGCGAAGG GGCGGCCGTC
CGCCTCAGGA TCTGCGATGA CGGCGAGGGA ATGCCGACGG GCTGGGAGAA CGCCAAGGCG
CGGGGCACCG GGCTCGGCAT GAAGCTGATC CGTGCCATGC TCGACCAGAT CGGCGCCCGC
CTCGACGTCG AGAACGCCGA CGGCGCCTGC TTCACCGTTC ACGCCTGA
 
Protein sequence
MVDPSQMHAV GPNGGPVDLP VDLDALTAEQ RDEFGVGILA LDAAGIVLAC NRAAGALCGL 
PPNTMIGRSF FRELVPSANV PSFYGRFLSG QRRSVADQAF EFVFGRIPAP LRARIGLRSG
ANGHIWLTIT PLEQIAAGPS REAVLAAIAQ RSRAEPVDPS LCEREPIHIP GSIQPNAVML
AADAASLEIL AFSANAADVL APDLFPPNGL NLEAVLPGAI VSAIRDGLAA HTLTDGRLLR
RSLTLPPRGE RFHLVAHAHL GRVIVELELA PERPEDFLAA SPLDAELAMM RLRAAESLTE
AAQIAALEIR AMTGFESVLV YRFDTDWNGE AIAEDMVPDW QRPLIGLRFP ASDIPAQARA
LYTKAKSRFV IDRDCVPVPL VADRAAGNAP IDLTFAQNRT LSPIHLEYQR NLGVDGSMSI
SIMVENRLWG LMIGHHRRPH YVAPETRAAA TVLTDAFAMR VQEIEGKALW GERQRHLDVQ
GRLVRGLTRS DDFVTSLTQG DPTLLDLFGA TGAGIVSDEA VCLVGVTPEA AKVRALADWL
RESLPPNETT FVTDTLVLHH APAADFTEIA SGLLAAFVGT SRQHLLFWVK PEVPSTVTWG
GDPRKPVLPG SGPVAVLPRR SFERWIEERR GHSTPWATWK VALAAQLADA VDGVVLRQRR
KIDELTGLLA DKERLLEQKD LLTREIDHRV KNSLQIVTAF LHMQRRQIAD PEARQAFSET
SARVMSVARV HDSLYQGESM EQVDLGQTIQ TLCSDLAGMA GDEHSVELTA EPGLMVPYRH
AVALSLITTE LVTNAFKYAG KPEKGARISV SVAGGEGAAV RLRICDDGEG MPTGWENAKA
RGTGLGMKLI RAMLDQIGAR LDVENADGAC FTVHA