Gene Mchl_4416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4416 
Symbol 
ID7117730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4673226 
End bp4674125 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content71% 
IMG OID643527115 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_002423120 
Protein GI218532304 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAC TGCCCGAAGT CGAGACCGTG CGCCGGGGGC TCGCCCCCGC GATGGTCGGG 
GCGCGCGTCG CCCGCGTCAC CCTGCGTAGG CCGAACCTGC GCTTCCCCTT CCCCGAGCGC
TTCGCCGAGC GGCTGGAGGG CACCACGGTG CTGGAGCTGG CGCGCCGGGC CAAATACCTC
ACGGCGCATC TCGATTCCGG CGAGAGCCTG ATCCTGCATC TCGGCATGAG CGGGCGCTTC
GATGTACGGC TGCCCGACGG CTCGAACCTC TCGCCGGGCG ACTTCTACCT CGAGGGGGCG
CTCGGCACGC CCAAGCACGA CCACGTGGTG ATGGCCTTCG CCAACGGTGC CACCGTCACC
TACAACGACG CCCGCCGCTT CGGCTTCATG GATCTCGTGG CCACGCGCGA TCTCGAGACC
TGCCGCCACT TCGCCAGCAT GGGCGTCGAG CCGCTCTCCG ACGCCCTCGA CGCGCCCCTG
CTCGCGCGCC TGTTCGCCCG GAAGATCACG CCGCTGAAGG CGGCACTGCT CGACCAGCGC
CTGATCGCGG GCCTGGGCAA CATCTATGTC TGCGAGGCGC TGCACCGCTC GGGCCTCCAC
CCGGCCCTGC CGGCGGGCGC GCTCGCCAAG CCCGACGGTT CGCCGGCGCC CAAGGCGAAG
ACACTCGTCA AGGAGATCAA GGCGGTGCTG ACGGAGGCAG TGGCGGCCGG CGGCTCCACC
TTGCGCGACT ACGCCCGGCC GGACGGGGAG CGCGGCGCCT TCCAGCACGG CTTCCGCGTC
TACGACCGGG TGGGCCATGC CTGCCCGACC AAGGGCTGTA CCGGCCGGGT CGGCCGGATC
GTGCAGGGTG GACGCTCGAC CTTCTTCTGC GAAACCTGCC AGGTCCTGCC GGTCCGGTAA
 
Protein sequence
MPELPEVETV RRGLAPAMVG ARVARVTLRR PNLRFPFPER FAERLEGTTV LELARRAKYL 
TAHLDSGESL ILHLGMSGRF DVRLPDGSNL SPGDFYLEGA LGTPKHDHVV MAFANGATVT
YNDARRFGFM DLVATRDLET CRHFASMGVE PLSDALDAPL LARLFARKIT PLKAALLDQR
LIAGLGNIYV CEALHRSGLH PALPAGALAK PDGSPAPKAK TLVKEIKAVL TEAVAAGGST
LRDYARPDGE RGAFQHGFRV YDRVGHACPT KGCTGRVGRI VQGGRSTFFC ETCQVLPVR