Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_4402 |
Symbol | |
ID | 7117716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 4652883 |
End bp | 4654574 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643527101 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_002423106 |
Protein GI | 218532290 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.377329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCC TCGCCGCTCC GTCGCTGTCG ATCGCCCTGC CGTTCGAGGC GGCGCTGGCC GAGATGGCCG CGCCCCTGCT CCTGCTCGAT GCGGGCGGCA GCGTCGTCTT CGCCAATGCC CACGCGGCGG CCTTGCTCGC CTGCGCCGAA CCGGTCGGCC TTCCCCTCAC CGCCCTGCTG GTGCCCTTCG GCGCCGCGGA GCCGGAGGCC GAGCCCATCC TAGAGGCTGT GCGCGCCGCC CGCCCCGTCC GGGCGCGGCT CACCCTCGGC GGCGACCGCC GCGTCGAGGC GGCGCTGGCG CCGCTCTCGG CCGGCGGCTT CGCCCTCACC TTCGAGGACG TGACCGAGCA ACTCCGCGGC GCGGCCCTGG CCCGGCAGGA GCCGCTCACC GGCCTGTGCA ACCGCGTCGG CCTGCACGAC CGCCTCGACG CGGCGCTGAC CGAGGCGGCC CGGACGGGGG CACCGCTCGC GGTGCTGATG CTCGACCTCG ATCGGTTCAA GACGGTCAAC GACACCCTCG GGCATCCGGT CGGCGATGCG CTCCTGCGCA AGGTCGCCGA GCGCCTGCGC CGGGCCACCC GCAGCGGGGA TCTGGTCGCA CGGCTCGGCG GCGACGAGTT CGCCATCCTT CAAGTCGATC CCCAAGTTGG ACCCCATGCT GGCGTCGAGC AGCCGCACGC GGCCGAGGCG CTGGCACGCC GCCTCGTCGA TCTCGTCGGG CGCACCTACG TCGTCGATGG CCACATGCTC AATGTCGGCG TCAGCGTCGG CGTCGCCATC GCCCCCGCCG ACGGCCAGAA CGCCGACGAC CTGCTGAAAC ACGCCGACCT CGCGCTCTAC CGGGCCAAGG CCGCGGGCCG GGGCACCTAC CGCTTCTTCG AGCCGGCGAT GAACGCGCAG ATGCAGGCGC GCCGCGGCCT GGAGATCGAC CTGCGCCGGG CAATGGCCCT CAAGCAGTTC GACCTCGCCT TCCAGCCGCA AATCCAACTG GAGAGCGGGG ACGTGACGGG CTTCGAGGCG CTGCTGCGCT GGAACCACCC CGAGCGCGGA CCGGTGTCGC CGGCCCTGTT CATTCCGTTG GCCGAGGAGA TCGGCGTCAT CGTCGGCATT GGCGAGTGGG TGTTGCGCAC CGCCTGCCGC GAGGCGGCGC GCTGGCCGCA CCCCGCATCG ATCGCCGTGA ACCTCTCGCC CGTGCAGTTC CGCGGCGGCC GGCTGGTCGA GACGGTGACG AACGTGCTGG CCCAGACCGA CCTCGACCCG GCCCGGCTGG AACTGGAGAT CACCGAAGGC GCGCTCCTCG AGAACACCGA CAGCGTGCTC GACGTGCTGA ACGGCCTGCG CGCGCTCGGC GTGAAGATCT CCATGGACGA TTTCGGCACC GGCTACTCGT CCTTGAGCTA CCTGCAGAAA TTCCCCTTCG ACAAGATCAA GATCGACCAG TCCTTCGTCC GCGGCATGGA GGGCAATGCC GAGTGCGGGG CGATCGTGCG GGCCATCGCC CGGCTCGGCG CCAGCCTCGG CATGCGCACC ACCGCCGAAG GGGTCGAGAC GGCGACGCAG CTCGACGCCA TCCGCGCCGA GGGCTGCACC GAGGTCCAGG GCTACCTGAC CGGACGCCCG ATGCCGGCCG CCCAGGCCGC CGCCCTGTTG TCCGCCTCGC CCGCTCCCTC GCCCTCGACC TTGCCCGCCT GA
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Protein sequence | MSALAAPSLS IALPFEAALA EMAAPLLLLD AGGSVVFANA HAAALLACAE PVGLPLTALL VPFGAAEPEA EPILEAVRAA RPVRARLTLG GDRRVEAALA PLSAGGFALT FEDVTEQLRG AALARQEPLT GLCNRVGLHD RLDAALTEAA RTGAPLAVLM LDLDRFKTVN DTLGHPVGDA LLRKVAERLR RATRSGDLVA RLGGDEFAIL QVDPQVGPHA GVEQPHAAEA LARRLVDLVG RTYVVDGHML NVGVSVGVAI APADGQNADD LLKHADLALY RAKAAGRGTY RFFEPAMNAQ MQARRGLEID LRRAMALKQF DLAFQPQIQL ESGDVTGFEA LLRWNHPERG PVSPALFIPL AEEIGVIVGI GEWVLRTACR EAARWPHPAS IAVNLSPVQF RGGRLVETVT NVLAQTDLDP ARLELEITEG ALLENTDSVL DVLNGLRALG VKISMDDFGT GYSSLSYLQK FPFDKIKIDQ SFVRGMEGNA ECGAIVRAIA RLGASLGMRT TAEGVETATQ LDAIRAEGCT EVQGYLTGRP MPAAQAAALL SASPAPSPST LPA
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