Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_4388 |
Symbol | |
ID | 7117702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 4639495 |
End bp | 4640598 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643527087 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002423092 |
Protein GI | 218532276 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.926126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.244304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCGGC GGCTCCTGCT GGGAGGGCTC GCCGCCCTCC CCTTCCTCCT CTGCGCGACC GGCGGGGTGC GGGCCGAGGA GCGGGTCGTC AACATCTACA ACTGGTCGGA CTACATCGAC CCGAAGGTGC TCGACGACTT CACCAAGGAG ACGGGGATCA AGGTCGTCTA CGACACCTAC GACAACAACG AGATCCTCGA GACGAAGCTC CTGGCCGGCA AGTCCGGCTA CGACATCGTC GTGCCCTCCG GCCCCTTCCT TCAGCGCCTG ATCAAGGCGG GCGTGTTCCT GCCGCTCGAC AAGGCGAAGA TCCCAAACCT CAAACATGCC TGGCCCGAGA TCAGCACCCG GCTCCAGGCC TATGATCCGG GCAACACGTT CGCCGTCGAT TACATGTGGG GCACCACCGG CATCGGCGTG AACGTGTCGG CCGTGCGCGA GCGGCTGGGC GCCAACGCCC CCCTCAATAG CTGGAGCCTC GTGCTCAATC CCGGCTCGAT CGCGAAGCTG AAGGATTGCG GAGTCATGCT CCTCGACTCC CCCGAGGATC TGATTCCCTC GATCCTGCCC TTCTACGGCT TCAAGTCGGA TTCGAAGCGT TGGGACGACA TCACCGCGGT GACCGATGCG CTCTACAAGG TCCGCGGCGC GGTGCGGAAG TTCCACTCCT CGGAATACGT CAACGGGCTC GCCAACGGCG ATGTCTGCCT CGCGGTCGGC TATTCCGGCG ACGTGATGCA GGCGAAGAAG CGCGCCGAGG AATCGAAGAA CGGCATCGAG ATCGCCTACT TCATCCCGAA GGAAGGCGCG CTGATGTGGT TCGACGCCTT CGCGGTCCCG AAGGATGCCG CCCACCCGGC CGAGGCGCAC GCCTTCATCG ACTACATGAT GCGTCCCGAA GTGGCGGCGG CCAACACCAA CTTCGTTTCC TTCGCCAACG GCAACCTCGC CGCGCGCAAG CTCGTGAAGC CGGAGCTTCT CAACAATCCC GGCATCTACC CCGACGAGAC GACGATGCAG CGGCTCTCGG TCAACACCGC CTGGAACGAC TCGACCCAGC GCTTCGTCAC CCGAGCCTGG ACGCGGGTGC GCACCGGCCG CTAG
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Protein sequence | MIRRLLLGGL AALPFLLCAT GGVRAEERVV NIYNWSDYID PKVLDDFTKE TGIKVVYDTY DNNEILETKL LAGKSGYDIV VPSGPFLQRL IKAGVFLPLD KAKIPNLKHA WPEISTRLQA YDPGNTFAVD YMWGTTGIGV NVSAVRERLG ANAPLNSWSL VLNPGSIAKL KDCGVMLLDS PEDLIPSILP FYGFKSDSKR WDDITAVTDA LYKVRGAVRK FHSSEYVNGL ANGDVCLAVG YSGDVMQAKK RAEESKNGIE IAYFIPKEGA LMWFDAFAVP KDAAHPAEAH AFIDYMMRPE VAAANTNFVS FANGNLAARK LVKPELLNNP GIYPDETTMQ RLSVNTAWND STQRFVTRAW TRVRTGR
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