Gene Mchl_4388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4388 
Symbol 
ID7117702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4639495 
End bp4640598 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content65% 
IMG OID643527087 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002423092 
Protein GI218532276 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.926126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.244304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGGC GGCTCCTGCT GGGAGGGCTC GCCGCCCTCC CCTTCCTCCT CTGCGCGACC 
GGCGGGGTGC GGGCCGAGGA GCGGGTCGTC AACATCTACA ACTGGTCGGA CTACATCGAC
CCGAAGGTGC TCGACGACTT CACCAAGGAG ACGGGGATCA AGGTCGTCTA CGACACCTAC
GACAACAACG AGATCCTCGA GACGAAGCTC CTGGCCGGCA AGTCCGGCTA CGACATCGTC
GTGCCCTCCG GCCCCTTCCT TCAGCGCCTG ATCAAGGCGG GCGTGTTCCT GCCGCTCGAC
AAGGCGAAGA TCCCAAACCT CAAACATGCC TGGCCCGAGA TCAGCACCCG GCTCCAGGCC
TATGATCCGG GCAACACGTT CGCCGTCGAT TACATGTGGG GCACCACCGG CATCGGCGTG
AACGTGTCGG CCGTGCGCGA GCGGCTGGGC GCCAACGCCC CCCTCAATAG CTGGAGCCTC
GTGCTCAATC CCGGCTCGAT CGCGAAGCTG AAGGATTGCG GAGTCATGCT CCTCGACTCC
CCCGAGGATC TGATTCCCTC GATCCTGCCC TTCTACGGCT TCAAGTCGGA TTCGAAGCGT
TGGGACGACA TCACCGCGGT GACCGATGCG CTCTACAAGG TCCGCGGCGC GGTGCGGAAG
TTCCACTCCT CGGAATACGT CAACGGGCTC GCCAACGGCG ATGTCTGCCT CGCGGTCGGC
TATTCCGGCG ACGTGATGCA GGCGAAGAAG CGCGCCGAGG AATCGAAGAA CGGCATCGAG
ATCGCCTACT TCATCCCGAA GGAAGGCGCG CTGATGTGGT TCGACGCCTT CGCGGTCCCG
AAGGATGCCG CCCACCCGGC CGAGGCGCAC GCCTTCATCG ACTACATGAT GCGTCCCGAA
GTGGCGGCGG CCAACACCAA CTTCGTTTCC TTCGCCAACG GCAACCTCGC CGCGCGCAAG
CTCGTGAAGC CGGAGCTTCT CAACAATCCC GGCATCTACC CCGACGAGAC GACGATGCAG
CGGCTCTCGG TCAACACCGC CTGGAACGAC TCGACCCAGC GCTTCGTCAC CCGAGCCTGG
ACGCGGGTGC GCACCGGCCG CTAG
 
Protein sequence
MIRRLLLGGL AALPFLLCAT GGVRAEERVV NIYNWSDYID PKVLDDFTKE TGIKVVYDTY 
DNNEILETKL LAGKSGYDIV VPSGPFLQRL IKAGVFLPLD KAKIPNLKHA WPEISTRLQA
YDPGNTFAVD YMWGTTGIGV NVSAVRERLG ANAPLNSWSL VLNPGSIAKL KDCGVMLLDS
PEDLIPSILP FYGFKSDSKR WDDITAVTDA LYKVRGAVRK FHSSEYVNGL ANGDVCLAVG
YSGDVMQAKK RAEESKNGIE IAYFIPKEGA LMWFDAFAVP KDAAHPAEAH AFIDYMMRPE
VAAANTNFVS FANGNLAARK LVKPELLNNP GIYPDETTMQ RLSVNTAWND STQRFVTRAW
TRVRTGR