| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4380 |
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| Symbol | |
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| ID | 7116544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 4622174 |
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| End bp | 4624627 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643527079 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(s) |
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| Protein accession | YP_002423084 |
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| Protein GI | 218532268 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.866609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAA TCGTCGCCTG TGTCGCGAGC CAGCACGATT TCGGCCTTGT TGCCGTTTCG
GCTGGGATCT GTCTGCTTGG CTGCTTCTCC ACCGTGACCC TGATGGCCGA GGCTGCCAGG
GCCGAGCGCC GGTCCGTTTC CCCCTGGCTG ATCGCGGCGG CGTTCGTGTT CGGCTGCAGC
GTCTGGTCGC TGCACTTCGT GGCGATGCTA GCGTTTCAGC CGGGTGCGCA GGCGGCCTAC
GGTCTTCTTC CCACCGCGGC CTCGATCGGG ATTGCGGTCG CCGGGGCGCT GATCGCCTTC
CTGATCTGGT GCCGGGCGGA CCACGACCCG CTCAAGGTGG CGGCGGCCGG CTTGGTGCTG
GCAGCGGCGA TTTCGGGCAT GCACTACGCG GGTGTGGGCG CGATGGCGGC CAACAGCCTG
CTCGCCTTCG AGGAGGCCCT TGTCCACGCT TCGCTCGGGC TCTGCGCGAC CCTTGCGGTG
ATCGCTCTCG CCCGGGCCGG CGATCTCGCC GGGCTTGGCC GCCGAATCGA GGTCAGCCTG
TGGCTGGCGC TCGCGATCTG CGGCCTGCAC TTCACCGGCA TGACGGCGCT CACCGTCGCG
CCCGCCGCCC CGGTGGAGGG GGGCGGGGTC GTCCTCGGTT CGACGCAGCT CGGCCTCGCA
GTAGGGCTCG TGAGCCTCGC CGTCCTCGCC GCCGGGCTCA CGGCGCTGCT GATGCAGCAG
CATCTCATGC GCCGCCGCAT GGACGAGCTG AGCCGCATGC GCCTGCTCGG CAACCTCGCC
CACGAGGTGC TGTTCATCCA CCGCGAGGGC CGGGTGGTCG AGATCAATCA GGCGGGCCTG
CGCCTGTTCG GGGCCCCGGC CTCCGAGATC ATCGGCCGGC CGCTGCTCGA CCTATTCGCG
GAGGCCGACG CTCCGGTTCT TCTGCGGCGC AGCCGGTGCC ATCCGGAGGA TCTGTTCCCG
GAGGAGTTCG AGGTCCGTAC CGCCGCCGGT ATCGCCGTGC CGGTGGAACT CACCTGCCGC
GCCATCGAGT ATCTCGGCCG GCCCGCCACG GCGGTGGCCC TGCGCGACCT CAGCCGGCGC
CGCCGCGACG AGGCGCGCAT CCGCCACCTC GCCCTGCACG ATGCCCTGAC CGATCTGCCC
AACCGCACCC TGCTGGAGGA GCGCCTGGGG CTTGCCCTCG AGACGGCGGC CGAGAACGGG
ACGAGCGTGG CCCTGGCCTA TCTCGACCTC GACCGGTTCA AGCCCGTCAA CGATTTCCAC
GGCCACGCCG CGGGCGACGC CCTGCTGGTC CAGGCGGCCA AGCGCATGCT GGCCGAGCTG
CGCCCGACCG ACACCCTCGC CCGGATCGGC GGCGACGAGT TCGTCATCGT GCTGGCCCAT
ACCCGCAGCC TCGCGCAGGT CGCCGAGACC GCCGAGCGTC TGGTCGCGGC GCTCGGCCGC
CCGTTCCAGA TCGAGGGCCA GATCGGGGGC TCGGTCGAGG GCTTGCGCGT CGAGATCGGC
GCCTCGGTGG GCATCGCTCT CTATCCCAGC GACGGCAGCA CCGCCGAGAG CTTGAAGCGC
GCCGCCGACA CCGCCCTGTA CAGGGTCAAG GACGAGGGCC GCGGCGCGGT GCGCTTCTTC
GAGGCCGCGA TGGACGAGCA GCTCCAGGCG CGCCGCCGGA TCGAGCACGA GCTGAGCGGG
GCGATCGCGC GGGGCGAATT GGCCCTCGAC TACCAGCCGA TCGTCAACGG CCGCACCGGG
GAGATCGAGA TCTTCGAGGC GCTGATCCGC TGGCACCATC CGGAGCTCGG CTGCGTGTTC
CCGGCGGACT TCATCCCGCT CGCCGAACAG ACGGACCAGA TCGGGCGGAT CGGCGCCTGG
GTGCTCGACA CCGCCTGCGC CGCCGCCGCA GCTTGGCCGC ATCCCTGGCG GGTCTCGGTC
AACGTTTCGC CGAAGCAGTT CCGCCAGCCG GGCTTCGCCG CCGGTGTGGC GGCGGTCCTC
GGCCGCCACG GGCTCTCACC GGGACGGCTG GTTCTGGAGA TCACCGAGAG TGTGTTCATC
CACGACGCGG CGACGGCGCT GACGGTGCTC ACGGCGCTCC GCACCCTCGG CGTGCGCCTC
GCGCTGGACG ATTTCGGCAC GGGTTATTCG AGCCTGAGCT ACCTGCAGCG GTTCCAGTTC
GACAAGATCA AGGTCGATCG GTCCTTCGTG CGCGGCCTCG GGCAGCACGC GGACGCCCTG
ACGATCGTGC GCGCGATCAC CCATCTCGGG CACAATCTCG GCCTCACGGT CACGGTCGAG
GGGGTGGAGA CGCAAGAGCA GCTTACGGTT CTGCGGGAAC TCGGCTGCGA CCAGATGCAG
GGCTACCTGT TCGCCCGGCC CGCTCCGATG ACGAACCTGT CGGAGACCGG CCCCTCGGAT
CGGGCGCGGC TGCGGGCCTT GTTCTCGAAC GACGCCGCCC GGGCCTACGC GTGA
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| Protein sequence | MLKIVACVAS QHDFGLVAVS AGICLLGCFS TVTLMAEAAR AERRSVSPWL IAAAFVFGCS
VWSLHFVAML AFQPGAQAAY GLLPTAASIG IAVAGALIAF LIWCRADHDP LKVAAAGLVL
AAAISGMHYA GVGAMAANSL LAFEEALVHA SLGLCATLAV IALARAGDLA GLGRRIEVSL
WLALAICGLH FTGMTALTVA PAAPVEGGGV VLGSTQLGLA VGLVSLAVLA AGLTALLMQQ
HLMRRRMDEL SRMRLLGNLA HEVLFIHREG RVVEINQAGL RLFGAPASEI IGRPLLDLFA
EADAPVLLRR SRCHPEDLFP EEFEVRTAAG IAVPVELTCR AIEYLGRPAT AVALRDLSRR
RRDEARIRHL ALHDALTDLP NRTLLEERLG LALETAAENG TSVALAYLDL DRFKPVNDFH
GHAAGDALLV QAAKRMLAEL RPTDTLARIG GDEFVIVLAH TRSLAQVAET AERLVAALGR
PFQIEGQIGG SVEGLRVEIG ASVGIALYPS DGSTAESLKR AADTALYRVK DEGRGAVRFF
EAAMDEQLQA RRRIEHELSG AIARGELALD YQPIVNGRTG EIEIFEALIR WHHPELGCVF
PADFIPLAEQ TDQIGRIGAW VLDTACAAAA AWPHPWRVSV NVSPKQFRQP GFAAGVAAVL
GRHGLSPGRL VLEITESVFI HDAATALTVL TALRTLGVRL ALDDFGTGYS SLSYLQRFQF
DKIKVDRSFV RGLGQHADAL TIVRAITHLG HNLGLTVTVE GVETQEQLTV LRELGCDQMQ
GYLFARPAPM TNLSETGPSD RARLRALFSN DAARAYA
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