Gene Mchl_4378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4378 
Symbol 
ID7116542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4619513 
End bp4620838 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content71% 
IMG OID643527077 
Productaromatic hydrocarbon degradation membrane protein 
Protein accessionYP_002423082 
Protein GI218532266 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.335616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGGG GGACGATCCG CGCGCTCGGG CTCGCGGGGG CTGTCGCGGC CGTTTCGATG 
GCGGGCGCGG GCGGGGCGCA GGCCGGTGCC TTCGGCCTGC GCGAGCAGAG TGCACAGGGG
TTGGGCGTCG CCTTCGCGGG TGCGGCGTCG GGCGGGGCAG GTGTCTCGTC GATCTTCTGG
AACCCGGCGA CGGTGACGAT GCGGCCGGGC TTCGCCAGCG AGCAGAGCCT GAGCTTCATC
AACCTGTCGG GGGAGATCAC GCCGACGGTG GGGACTGCGC CGGGCCTGCT GCCCTTCGGC
GCCTCCGGCG AGGTCGGGCA GGGCGCCGTG GTGCCGTCGG GCGCCACCTC CTACCAGCTC
ACCGACCGTC TCTGGGTCGG CATCCAGACC GGCGCGCCCT ACGGCCTCGT CACCAAGCCG
CGCCAGGATT GGGCGGGCGC GGTCTATGCC CGCTCCTCGC GGATCTTCTC GCTGGCCTTC
AATCCGGTGG TCGGCTTCAA GGTCAACGAC TGGCTGTCCG TCGCCGCCGG CCCGAGCATC
GAGTATTTCC GCCTGACCCT GCGCGCGGCC GTGCCGGTGG CCGGCACCTT CCCGGGCCTC
TACCCGTCGG GCTTCATCAA GGGCGAGTCC TGGGGCGTGG GCTTCACCGC CGGTGTCCTG
ATCACCCCCG CCGCCGGCAC GGCGATCGGC GTCGGCTACC GCTCCTCGGT CCACCACGAC
ATCGCGGGCT CGATCGGCTT CCCCGACCCG CGGCAGGCCA TCGCCCTGGG GCAGGTGCGG
GCCAACCTCA ACACGCCCGA GAAGGTCAGC GTCGGCCTGA CCCAGGCGAT CAACCCGGTC
ACCCGGATCA ATCTCGGCTT CGAGTGGGAC AACTGGTCGA GGCTCGGCGA TGTCGGCATC
GTCTCGCGGG CGCTCGGCGT GACGGTCAAC CACCTGCCGC TCAACTTCAA GGACTCGTTC
TTCTACTCGA TCGGTGCCGA GTACGACTGG TCGCCGAACC TGACCCTGCG GGCCGGCTTC
GGCTACGACA ACGTGCCGAT CGACTTCTCG AACCGCTCGG CGCGCCTGCC CGACAGCGAC
CGCTACGTCG TCTCGATCGG CGGCAGCTAT CGCTGGAGCG AGAAGGTGCT GCTGACGGCC
AGCTACGCCC ATGCCTTCTT CGACCGCGGC CTTCTCCTGG CGGGCCCCGG GCGCGACTAC
AACATCGGCA ACATCCCGCT CGCGGCCTCC ACCGACGTCA GCGCCGACGT CGTCTCGGTC
GGGTTCCGCT ACCAGTGGGA CGCCCCCGCC GCCGTCGCCC CGGCCCCGCT GGTGCGCAAG
TTCTGA
 
Protein sequence
MTGGTIRALG LAGAVAAVSM AGAGGAQAGA FGLREQSAQG LGVAFAGAAS GGAGVSSIFW 
NPATVTMRPG FASEQSLSFI NLSGEITPTV GTAPGLLPFG ASGEVGQGAV VPSGATSYQL
TDRLWVGIQT GAPYGLVTKP RQDWAGAVYA RSSRIFSLAF NPVVGFKVND WLSVAAGPSI
EYFRLTLRAA VPVAGTFPGL YPSGFIKGES WGVGFTAGVL ITPAAGTAIG VGYRSSVHHD
IAGSIGFPDP RQAIALGQVR ANLNTPEKVS VGLTQAINPV TRINLGFEWD NWSRLGDVGI
VSRALGVTVN HLPLNFKDSF FYSIGAEYDW SPNLTLRAGF GYDNVPIDFS NRSARLPDSD
RYVVSIGGSY RWSEKVLLTA SYAHAFFDRG LLLAGPGRDY NIGNIPLAAS TDVSADVVSV
GFRYQWDAPA AVAPAPLVRK F