Gene Mchl_4348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4348 
Symbol 
ID7116511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4593509 
End bp4594765 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content66% 
IMG OID643527046 
Productcysteine desulfurase, SufS subfamily 
Protein accessionYP_002423052 
Protein GI218532236 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01979] cysteine desulfurases, SufS subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC CCGTCCGTAC CACTGCCCAG GACTCGTCCT ACGACGTCGA AGCGATCCGG 
AAGGAATTCC CGATCCTGTC GGAAAAGGTC TACGGCAAAC CGCTCGTCTA TCTCGACAAC
GCCGCCTCGA CGCAGAAGCC GCGGGCCGTG ATCGACGCGA TGGTCTCCTG CATGGAGACC
GGCTATGCCA ACGTGCACCG TGGCCTGCAC TACATGGCCA ATGCCGCGAC CGAGGGGTTC
GAGGGCGCGC GCGAGACCAC GCGCCAGTTC CTCAACGCGG CCTCGACCGA CGAGATCATC
TTCACCCGCA ACGCGACCGA GGCCTACAAC CTCGTGGCCT CCTCCATGGG CTGGGCCGGT
CTGATCGGGG AGGGGGACGA GATCATCCTC TCGATCATGG AGCACCACTC CAACATCGTG
CCCTGGCATT TCCTGCGCGA GCGGCGCGGC GCCGTCATCA AGTGGGCGCC GGTCGATGAC
GACGGCAACT TCCTGATCGA GGAATACGAG AAGCTCTTCA CGCCGCGCAC CAAGATGGTG
GCGATCACCC ACATGTCGAA CGTGCTCGGC ACGGTGACGC CGGCCGAAGA GATCGTGCGC
ATCGCCCACG CCCACGGCGT GCCGGTGCTG CTCGACGGGG CGCAGAGCGC GGTGCACCGC
CCGGTCGATG TGCGGGCGCT CGATTGCGAC TTCTTCGTCT TCACCGGCCA CAAGGTCTAC
GGGCCGACCG GCATCGGCGT GCTCTACGGC AAGAAGGAGT GGCTCGACCG TTTGCCGCCC
TACCAGGGCG GCGGCGAGAT GATCCGCACG GTGAGCCAGG ACGCGATCAC CTACAACGAT
CCGCCCCACC GCTTCGAGGC GGGCACGCCG GCGATCATCG AGGCGGTCGG CCTCGGCGCG
GCGCTGGAAT TCATGATGAA GCTCGGCCGC GACAAGATCG CTGCGCACGA GGCGATGCTT
ACCGCCTACG CCCAGGAGCG GCTCGGCGCG ATGAATTCGA TCCGCCAGAT CGGCAATTCC
CGCGACAAGG GCGGCGTCAT CGCCTTCGAG GTGAAGGGCG CGCACGCCCA CGACATCGCC
ACCGTGATCG ACCACCAGGG CGTCGCGGTG CGGGCCGGCA CCCACTGCGC GATGCCGCTG
CTGACGCGCT TCGGTGTCAC CTCGACCTGT CGCGCCTCGT TCGGTCTGTA TAATACGACG
CAGGAAATCG ATGTCCTGGC CGCGGCTCTG GCCAAGGCCG AGATGCTGTT CGCCTGA
 
Protein sequence
MNAPVRTTAQ DSSYDVEAIR KEFPILSEKV YGKPLVYLDN AASTQKPRAV IDAMVSCMET 
GYANVHRGLH YMANAATEGF EGARETTRQF LNAASTDEII FTRNATEAYN LVASSMGWAG
LIGEGDEIIL SIMEHHSNIV PWHFLRERRG AVIKWAPVDD DGNFLIEEYE KLFTPRTKMV
AITHMSNVLG TVTPAEEIVR IAHAHGVPVL LDGAQSAVHR PVDVRALDCD FFVFTGHKVY
GPTGIGVLYG KKEWLDRLPP YQGGGEMIRT VSQDAITYND PPHRFEAGTP AIIEAVGLGA
ALEFMMKLGR DKIAAHEAML TAYAQERLGA MNSIRQIGNS RDKGGVIAFE VKGAHAHDIA
TVIDHQGVAV RAGTHCAMPL LTRFGVTSTC RASFGLYNTT QEIDVLAAAL AKAEMLFA