Gene Mchl_4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4290 
Symbol 
ID7117524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4527684 
End bp4530824 
Gene Length3141 bp 
Protein Length1046 aa 
Translation table11 
GC content69% 
IMG OID643526988 
Productacriflavin resistance protein 
Protein accessionYP_002422994 
Protein GI218532178 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0982359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0358979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCA ACGTCTCGGC CTGGGCGATC CGCAAGCCGA TCCCCTCCCT CGTCCTGTTC 
CTCGTGCTGA TGGTGCTCGG CCTCGTCAGC TTCCGCGCCC TGCCGATCAC CCGGTTTCCC
AATATCGACA TCCCGATCGT CTCGGTGACG GTCACGCAGA GCGGCGCCGC ACCCTCCGAG
TTGCAGACCC AGGTCACGAA ATGGGTCGAG GATTCGGTGG CCGGGGTGAA GGGGGTCAAG
CACATCCTCT CGACCATCTC GGAGGGCGCC TCGATCACCA CGATCGAGTT CCGCCTGGAG
GTGAACCAGG ACCGCGCCGT CAACGACGTG AAGGACGCGA TCTCGAAGAT CCGCATCAAC
CTGCCGCGCA CCATCGACGA GCCGATCATC AGCCGCGTCG AGATCGCCGG CCTGCCGATC
ATGATCTACG GCGCGTCCGC CCCGGCGATG ACGCCCGAAG ACCTGTCGTG GTTCGTCGAC
GACGTGGTGG CGCGCCAGCT CCAGGGCGTG AAGGGGGTGG GCGGCGTCGA GCGCCTCGGC
GGCGTGGCCC GCGAGATCCG CGTGACCCTG AAGCCCGACC GCCTGCTCGC GCTCGGCATC
ACCGCGGCCG ACGTGAATCG GCAATTGCGC CTCACCTCCG CCGACATGGC CGGCGGGCGC
GGCGAACTCG CGGGCGGCGA GCAGTCGATC CGCACGCTCG GCGCCTCGGC GAGCCTGGAG
ACGCTGGGCG CGACCTCCAT CGTCGTGCCG GGCGGGCGCA AGGTCCGCCT CGACGAGTTG
GCGAGCCTGA TGGACGCGGC CGAGGAGCCG CGCACCTTCG CCCGCTTCAA CGGCGAGCCG
GTGGTGGGCT TTGCCATCTC CCGGGCGATG GGGGCGAGCG ACGCCGAGGT CGCGGTCGCC
GTGGCCAAGC GCATCGAGGA CCTGCACGCC GAGAATCCGG GCGTGCGCTT CGATCTGATC
GACACCAGCG TCGTCAACAC CATCGGCAAC TACCACTCGG CGATGATGGG CCTGCTGGAA
GGCGCCGCCC TCGCCGTGAT CGTGGTGTTC CTGTTCCTGC GGGATTGGCG CGCCACCCTG
ATCGCGGCGG TGGCGCTGCC GCTCTCGGTG CTGCCGACCT TCTGGGTGAT GAGCGCGCTC
GGCTTCTCGC TCAACGCGGT CAGCCTGCTT GCGATCACGC TGGTCACCGG CATCCTCGTC
GATGACGCCA TCGTCGAGAT CGAGAACATC GTCCGCCACA TGCGGATGGG CAAATCCGCC
TACCGCGCGG CGCTCGAAGC CGCCGACGAG ATCGGGCTCG CGGTCATCGC CATCACCGCG
ACCATCATCG CGATCTTCGC CCCCGTCTCC TTCATGCCCG GCATCGCCGG CCAGTACTTC
AAGCAGTTCG GGCTCACTAT CGCCGCGGCC GTGTTCGTGT CGCTGCTCGT CGCGCGCCTC
ATCACGCCGC TGCTCGCCGC CTACTTCCTG CGCGACCACG GCCCGGACCA CGAGCGCGAG
GGTCTGGTGA TGCGGGCCTA TACCCGCCTC GTCGCGTGGT CGGTGCGGCA CAAATACCTG
ACGCTGATCC TCGGCCTCGC CTGCTTTGCC GGATCGATCG CCTCGACCCG GCTGCTGCCC
GCGGGCTTCA TCCCGGCGGA GGACGCGGCG CGCACGATGT TCGTAGTCGA ACTGCCCCCC
GGCGCCCGGC TCGACGACAC GCAGCGCCTC TCCGACGGCC TTGTCGAGAC CCTCCGCCAG
ATGCCCGAGG TCCGCTCGGT CTTCGTCGAT GGCGGGCGCC AGTTGCCCGG CAAGAAGGAG
GTGCGGCTGG CGAGCCTCAC CGTGAACCTC ACCCCGAAGA GCGACCGCGC CCTGACCCAG
AAGCAGGTCG ATCTCAAGAT CTCGAGCGTC CTGCGGCAGG TTCCCGACAT CCGCTTCTGG
TCGCTGCAGG AGGGCGGGCA GCGGGAATTC GCGCTGATCG TCTCGGGCCC CGACAAGGCC
GTGGTCGCGG ATGTCGCCGC CCGCCTCCAG CGCGAGGCCG CGGGCGTCCC CCACCTCGTC
AACGTGATCT CGACCGCGCC GCTGGACCGC ACCGAGATCC GCATCACCCC GAAAGCGGGG
GTCGCCGCCG ATCTCGGCGT CTCGACCGAC GTCATCGCCG AGACGGTGCG GGTCGGCACC
ATCGGCGACA TCGCCGCCAA CCTCGCCAAG TTCAACGCCA AGGACCGGCA GGTCCCGATC
CGGGTGATGC TGCCCGAGCG GCTGCGCGGA CAATTGCCCG AGATCGCCAG CTTGAAGGTG
CCGGTGAAGG CCGGCGCGGC GGTCCCGCTT GCCACCGTGG CCGACCTGAC GCTGGGGCGC
GGCCCGACCG CCATCGACCG CTACGACCGC ACCGTGCGCG TCGCCGTCGA GGGCGATCTC
CAGGGCTCGG ACGCGCTCGG CTCGATCATC GAGCAGGTGA TGGCGCTGCC CGCCGCAACA
AATCTCCCCG AGGGCGTCAC CATCCGCCAG ACCGGCGACG CCGAGGTGAT GGGCGAGGTG
TTCGAGGGCT TCGCGCTGGC CATGGGCGCC GGGCTGATGA TGGTGTTCGG CGTCCTCGTG
CTGCTGTTCG GCAACTTCCT CCAGCCGCTC ACCATCCTGT TCTCGCTGCC GCTCTCCATC
GGCGGGGCGA TCCTGGGGCT GCTCGTCTTC CACATGCCGA TCTCGATGCC GGTGGTCATC
GGCATCCTGA TGCTGATGGG TGTGGTGACG AAGAACGCGA TCATGCTGGT CGATTTCGCC
ATCGAGGAGA TGGCCCGCGG CGTCGATCGC GTCACCGCCA TCGTCGATGC CGGGCGCAAG
CGGGCGCGCC CCATCGTGAT GACCACCATC GCCATGGCCG CGGGCATGGT GCCGTCAGCC
CTCGCGCTCG GGATCGGCGG CGAGTTCCGC GCACCGATGG CGGTGGCGGT GATCGGCGGG
CTGATCGTCT CGACGGGCCT ATCGCTCGTC TTCGTGCCGG CGATCTTCCT GCTCGTCGAC
GATCTGTCGC GGCTGTTCGT GCGCCTGTTC GGCCGCTTCG TCGGCGGGGC GGACGAGCCG
GAGGAAGAAG ACGACGCGTA TCGTCCGGGT CCGCCCGCCA ACGCCGCCGG TCTCGGCCGC
CGAGGGGTGG CCGCCGAGTG A
 
Protein sequence
MRLNVSAWAI RKPIPSLVLF LVLMVLGLVS FRALPITRFP NIDIPIVSVT VTQSGAAPSE 
LQTQVTKWVE DSVAGVKGVK HILSTISEGA SITTIEFRLE VNQDRAVNDV KDAISKIRIN
LPRTIDEPII SRVEIAGLPI MIYGASAPAM TPEDLSWFVD DVVARQLQGV KGVGGVERLG
GVAREIRVTL KPDRLLALGI TAADVNRQLR LTSADMAGGR GELAGGEQSI RTLGASASLE
TLGATSIVVP GGRKVRLDEL ASLMDAAEEP RTFARFNGEP VVGFAISRAM GASDAEVAVA
VAKRIEDLHA ENPGVRFDLI DTSVVNTIGN YHSAMMGLLE GAALAVIVVF LFLRDWRATL
IAAVALPLSV LPTFWVMSAL GFSLNAVSLL AITLVTGILV DDAIVEIENI VRHMRMGKSA
YRAALEAADE IGLAVIAITA TIIAIFAPVS FMPGIAGQYF KQFGLTIAAA VFVSLLVARL
ITPLLAAYFL RDHGPDHERE GLVMRAYTRL VAWSVRHKYL TLILGLACFA GSIASTRLLP
AGFIPAEDAA RTMFVVELPP GARLDDTQRL SDGLVETLRQ MPEVRSVFVD GGRQLPGKKE
VRLASLTVNL TPKSDRALTQ KQVDLKISSV LRQVPDIRFW SLQEGGQREF ALIVSGPDKA
VVADVAARLQ REAAGVPHLV NVISTAPLDR TEIRITPKAG VAADLGVSTD VIAETVRVGT
IGDIAANLAK FNAKDRQVPI RVMLPERLRG QLPEIASLKV PVKAGAAVPL ATVADLTLGR
GPTAIDRYDR TVRVAVEGDL QGSDALGSII EQVMALPAAT NLPEGVTIRQ TGDAEVMGEV
FEGFALAMGA GLMMVFGVLV LLFGNFLQPL TILFSLPLSI GGAILGLLVF HMPISMPVVI
GILMLMGVVT KNAIMLVDFA IEEMARGVDR VTAIVDAGRK RARPIVMTTI AMAAGMVPSA
LALGIGGEFR APMAVAVIGG LIVSTGLSLV FVPAIFLLVD DLSRLFVRLF GRFVGGADEP
EEEDDAYRPG PPANAAGLGR RGVAAE