Gene Mchl_4289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4289 
Symbol 
ID7117523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4526465 
End bp4527673 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content79% 
IMG OID643526987 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002422993 
Protein GI218532177 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0321009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCCC GTTTGCCCTT CCGTCCCGCT GCGGCGTGCC TCGCCGCCCT CCTCGTCGCG 
ACCCCGCCGG CCCGCGCCGC CGAGGCGCCC CCCGCGGCCG GGGTGCCCGA TCCCGCCACG
CTCCTGCCCG CGGTGAGCGT GGTCCCGGCC GAGCGCCGGG AGATCGTCGA GCGGGCGGTC
GTGACCGGGA CGCTGGTCCC CCGCGACGAG ATCCTCGTCG CCCCCGAGGT CGAGGGCCTG
CGCATCGTCG CGCTGCTCGT CGAGGAGGGC GACCAGGTCG AGCGCGGCGC GGTGCTGGCG
CGGCTCTCGC TGGAGATGAT CGAGACACAG GAGGCCGCCA ACCTCGCGGC CACCGCGAAG
GCGGAGGCGG CGATCCTCCA GGCGAAGAGC CAGATCGTCC AGGTGCAGGC GGCCCAGACC
GAGGCGCGCC AAGCCCTGGA ACGGGCGCAG GCGCTGGTGC GGACCGGCAA CGCCACCGCC
GTCACCCTGG AACAACGGGT CTCGGCGGCG CAGGGCGCCG ACGGCCGGCT CGAGGCGGCG
CGGGCCGGGC TGGCCCTGGC CGAGGCGGAT CTGGCCGCGG CGCGGGCGCA GGGGCGCGAG
ATCGGCCTGC GCCGGGCCCG CACCGAGATC CGCGCGCCGG AGGCCGGGAT CGTCAGCCGC
CGCACGGCCC GGGTCGGCGC CACCGCGAGC GCGGTCGGCG AGCCGCTGTT CCGCCTGATC
GCCCGCGGCG AGATCGAGCT GGAGGGCGAG GTGCCGGAAT CCGCCCTGCC GCGGCTCCGA
GCCGACGCCC CGGCGCGGCT CGAATGGGAG GACGGGCGCG TGACGCAAGG CGCCGTGCGC
CGGGTCTATC CCGAGGTCGA TCGGGCGACG CGCCTCGGCC GGGTCCGCAT CCGCCTGGAC
GCCGACCCGG CGCTGCATAT CGGCGCCTTC GCCCGCGGCC GGGTCGAGGT GGCCCGGCGC
GAGGGCGTGG CGGTGCCGCT CGCCGCCGTG CTCTACGCCG CGGACGGCTC GGCGAGCGTC
CTCGCTGTTG CCGACGGCCG CGTCTCCGCC CGCCGGGTCG AGACCGGCCT CTCGGCCGAG
GGCTTCACCG AACTGCGCTC CGGCATCGCG GCGGGGGAGG CGGTGGTCGC CCGCGCCGGC
TCGTTCCTGC GCGACGGCGA CCGGGTGCGG CCCGTCCCGC CGACGGCCCG GGCGGCCGCG
GCCCGCTGA
 
Protein sequence
MPARLPFRPA AACLAALLVA TPPARAAEAP PAAGVPDPAT LLPAVSVVPA ERREIVERAV 
VTGTLVPRDE ILVAPEVEGL RIVALLVEEG DQVERGAVLA RLSLEMIETQ EAANLAATAK
AEAAILQAKS QIVQVQAAQT EARQALERAQ ALVRTGNATA VTLEQRVSAA QGADGRLEAA
RAGLALAEAD LAAARAQGRE IGLRRARTEI RAPEAGIVSR RTARVGATAS AVGEPLFRLI
ARGEIELEGE VPESALPRLR ADAPARLEWE DGRVTQGAVR RVYPEVDRAT RLGRVRIRLD
ADPALHIGAF ARGRVEVARR EGVAVPLAAV LYAADGSASV LAVADGRVSA RRVETGLSAE
GFTELRSGIA AGEAVVARAG SFLRDGDRVR PVPPTARAAA AR