Gene Mchl_4265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4265 
Symbol 
ID7117499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4501781 
End bp4504573 
Gene Length2793 bp 
Protein Length930 aa 
Translation table11 
GC content73% 
IMG OID643526963 
Productsignal transduction histidine kinase 
Protein accessionYP_002422969 
Protein GI218532153 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain
[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.588648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.462436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAC CGCCCGACGA TTGTCCAGCA TCCGGTGAGG CCGGCGCAGA GGCCGAGAGG 
CTGGCCGCGC TGGCCTGCTA CGGCATCCTC GACACGCCCG CCGAGGCCGC GTTCGACGAT
GCCGTGGCCT TGGCCGCCCA GCTCTGCGCC ACGCCGACCG CCCTCGTCAG CCTGGTGACC
GGCGACCGGC AATGGTTCAA GGCGCGGCTC GGCTTCGCCC CCAGCGAGAC CGGGCTCGAC
CGCTCGGTCT GCGTTCACGC CCTGGCCGGG CGGGGCTTGC TGGTCATCCC CGATCTCGCG
GCCGACCCGC GCACCCGCAC CAACCCGCTG GTCACGGGAG AGCCCGGCAT CCGCTTCTAT
GCCGGCGCCC CCCTGGTGAC GCCTGAGGAT CGGGCGATCG GCACCCTGTG CGTGCTCGAC
ACCAAGCCCC GGCCGGAGGG TCTGAGCGCG GCCCAAGGGG CCGGTCTCGA AGCGCTCGCC
CGCACGGTGA TGACGCAGCT CGAACTGCGC CGGGGCATCG CGGCCCGGAA GACCGAGGCC
GCGGCTCTGG CCGACAGCGA GTTCCGTCTG CGGCTCGCGA TCGAAGCGGC CGGTGCCGGC
ATCTTCGACT ACGACCTCGT GGCGGGCACC CTCGCCTGGG ACGGGCGGAG CCGCGCCCTG
TTCGGGGTCG GGCCGGACGA GGCCGTGAGC TATGCCGGCA CCTTCCTCGC CCGCCTCCAC
CCCGAGGACC GGGCGCGCAC CGATGCCGCC GTGCAGGCGG CCCTCGACCC CGCCGGGCCC
GGCCTGTTCG ATGCCACCTA CCGCACCGTG ACGGAGGACG GCACGGTGAT CGCCTGGGTC
GCGGCCCGCG GCACCCTCGT CGTCGAAACG GATGAGGGGA TCAAACGGGC GCGGCGCTTC
GTCGGCACGG TGCGCGACGT CACCGCCGAG CGCACGGCGC AGGTCGCCGT CGCCGCCACC
GAGGAGCGCT ACCGCCTCGT CACCCGCGCC ACCAACGACG CGATCTGGGA CTGGGACCTC
GCCGCCGACC ACGTGCTGTG GAACGAGGCC CTTCAGGCCG CCTATGGCTG GGCGCCGGAG
ACGGTCGAGC CGACCGGCCG GTGGTGGCTC GACCACATCC ACGCCGAGGA TCGCCCCCGC
GTCGAGGCGG GCATCCGCCG CGTCATCGGC GGCGGCGGCC ACGATTGGCA CCACGAATAC
CGCTTCTGCC GCGCCGACGG CGCCTATGCC GACGTGCTCG ATCGCGGTTC GATGGTGCGC
GGGGCCGACG GCAGGCCGCT GCGCATGATC GGCGCCATGC TGGATCTGAC CGAGCGCAAC
CGCGTCGCCG CCCAGCTCCG GGCGGTGGTC GAGGGCGCGA ATATCGGCAT CGTGCAGATC
GATCCGCGCA CCATGATCGC GCTGGAGGCC AACCCGAAGC TCTGCGCGAT CTGGGGGGCG
GAGGAATCCG ACATCGTCGG ACATTCCATT GCCAAGTGGA CGCCGGAAGC GGATGCGGCG
GAGCGCGACC AGCTCCACCG CCGGCTCGCC GCGGGCGAGA TCGTGCGTGA GACCCTGGAG
AAGCGCTACC GCCGCAAGGA CGGGCGCCTG ATCTGGGGCC GGGTCAACCT CGTCTCGCAG
GCCCGCGGCG AGGCGCTCCA GGCCACGGCG ATGATCGAGG ACATCACCGC GGAGAAGGCG
ACCGAGGCAC GCCAGACCGC GCTGATCGAA CTCGGCGACA CCTTGCGCGA CGCCGCCGGC
CCCACCGAGA TCCGTGGGAT CGCGGCCCGG ATCCTCAGGC GCAGCCTCGA CCTCTCGGAG
GCTGGCTACG CGGCCATCGA TGCCACCGTC GGCGGCTTCG CGATCGGGCG CGCGAGACCG
GACGGGACGA TGAGCCCCGC GCCGTTTCCG GCCATGCTCG CGCGGCTGCG CCGCGGCGAG
ATCCTGGCCG TGCCCGATCT GACCGCCGAA CCGGACCTCG CGCCGGATGC GGGCGGCTAC
GCGGCGGCCG GCGCCCGCGC GCTGATCGGC GTGCCCTTGA CGCGGCGGGG CGCCCTCGTC
GGCCTCGTCT ATGCCCACGC CGCCGAACCC CGGGCCTGGG ACGCGGGCGA GGTCGATTTC
GTCCGCGAGG TGGCCGGTCG GATCTCCGTG GCGCTCGCCC GCATCCAGGC CGAGGAGCAG
CAGCGCTTCC TCAACCGCGA ACTGAGCCAC CGGTTGAAGA ACACCCTGAC CATGGCCCAG
GCCATCGCCT CGCAGACGCT GCGCAACGCG ACCGACATCG CCTCGGTGAA GGAGGCGCTG
GTGGCCCGGC TGGTGGCGCT CGGCAAGGCG CACGACATCC TGCTCTCGGG CGAGGGCGAG
GGGGCGGCGC TGGAGGCGGT GATCGCCGGC GCGCTCACCA TCCACGACGA CGGCGAGCCC
GGCCGCATCC ACCTGTCCGG CCCGGACCTG GAGGTCGGGC CGAAAGCCGC CCTGTCGCTG
GCGCTGATGA TCCACGAACT CGCCACCAAT GCCGCCAAGT ACGGCGCCTT CTCGGTGCCG
GGCGGGCGCG TCGGGGTGAA CTGGCACGTC GCGCGGGCGC GTTGGCCGGA GGATGCGGAG
GATGCGGGGG AGGCCGAGCC GGTCATCACG ATGACCTGGG CCGAGACCGG CGGGCCGCCG
GTCGCCGCGC CCACCCGCAA GGGTTTCGGC TCGCGGCTGA TCGAACGCGG GTTCTCCGGG
GCGGTCGGCG GCGAGACGCA GATGATCTAC GCCCGAGAAG GGGTGACGTG CCGGATCAGG
GCGCCCCTGA AGGGTCTTCT CGAAAAAGAA TAG
 
Protein sequence
MSRPPDDCPA SGEAGAEAER LAALACYGIL DTPAEAAFDD AVALAAQLCA TPTALVSLVT 
GDRQWFKARL GFAPSETGLD RSVCVHALAG RGLLVIPDLA ADPRTRTNPL VTGEPGIRFY
AGAPLVTPED RAIGTLCVLD TKPRPEGLSA AQGAGLEALA RTVMTQLELR RGIAARKTEA
AALADSEFRL RLAIEAAGAG IFDYDLVAGT LAWDGRSRAL FGVGPDEAVS YAGTFLARLH
PEDRARTDAA VQAALDPAGP GLFDATYRTV TEDGTVIAWV AARGTLVVET DEGIKRARRF
VGTVRDVTAE RTAQVAVAAT EERYRLVTRA TNDAIWDWDL AADHVLWNEA LQAAYGWAPE
TVEPTGRWWL DHIHAEDRPR VEAGIRRVIG GGGHDWHHEY RFCRADGAYA DVLDRGSMVR
GADGRPLRMI GAMLDLTERN RVAAQLRAVV EGANIGIVQI DPRTMIALEA NPKLCAIWGA
EESDIVGHSI AKWTPEADAA ERDQLHRRLA AGEIVRETLE KRYRRKDGRL IWGRVNLVSQ
ARGEALQATA MIEDITAEKA TEARQTALIE LGDTLRDAAG PTEIRGIAAR ILRRSLDLSE
AGYAAIDATV GGFAIGRARP DGTMSPAPFP AMLARLRRGE ILAVPDLTAE PDLAPDAGGY
AAAGARALIG VPLTRRGALV GLVYAHAAEP RAWDAGEVDF VREVAGRISV ALARIQAEEQ
QRFLNRELSH RLKNTLTMAQ AIASQTLRNA TDIASVKEAL VARLVALGKA HDILLSGEGE
GAALEAVIAG ALTIHDDGEP GRIHLSGPDL EVGPKAALSL ALMIHELATN AAKYGAFSVP
GGRVGVNWHV ARARWPEDAE DAGEAEPVIT MTWAETGGPP VAAPTRKGFG SRLIERGFSG
AVGGETQMIY AREGVTCRIR APLKGLLEKE