Gene Mchl_4228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4228 
Symbol 
ID7117462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4454091 
End bp4455293 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content46% 
IMG OID643526939 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_002422945 
Protein GI218532129 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0224255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTGT CCTTGGCAGT GAAGATGTTT GCGGGATTAA TATTTTTCAT CATAGTTGCT 
AGACTCCTCA GCGAGGAACA ATTAGGATTT GTAACCTTTG TATTTGCGTG TTCAGCTTTC
GGCGCCTTGT TGAGCGACCT AGGCCTTGGA ATGAAAATAT TAAAAGATGT TTCTGCTGAG
CCTGAACGCG CCAGATTAAT CGTACTTGAG GCCTTATACC TTAAATTTTT AGCTTTGCTG
CCTGCGATGC TGGTGCTGTG CGTCCTATTC ATCATGAAAG ATATAAACCA AGCATACCGG
TTGAGCGCGA TTTCTCTCGT TGTTGGAACG CTGATAGGAT CGGTGGGAGA TACTGCGCTT
TTCGCTCTGC GTGCTGCCAA TAGATATGCA GCGGAGGCTG TTACAGTACT TCTCTGCTCA
ATTGTTTACC TTCTGCTCAC ACTGATAGCT GGTCTTGCCG AGGGCGGAAT TGTGGGCATA
TCATTGTCCT TCTTGGCCAG CAGAATGCTC TATGCCGCTG TGGTCCTACT TATTGTCAGA
AGCTCATTCC CTTCAACTCA AGGCACAACC AATAAGAGGA GCTTGTGGAT AGGATTCCGC
AGAGCATTTG GCTGGGCCGC CTTGTCTAAC TTAAGCTATA TCAATGGGCA GATTGACAAT
ATAATGATAG TTTCGCTTGT AGGATTGGCC GAGAATGGGG TATATCAAGC CGGAGCAAAA
TTTGTTGCAA GCGCTGTTTC TTTCTCCTCG ATAATTGTCA ATGTGGGCAT CCCAAAAATT
TCAGCATTAA AGAAGGAGGA TGCGCACAAG CTCAAAGCTG AAACAGGATT GTGGCTGCAG
ACCGTAGGCG TGGGAGCGAT TTTTGCGAGC TTATTTTTTC TATTTGGACC TGTGATTACA
AAATACCTGG TTGGAGCAAA GTATGAATCT GTTAATTCCC TCTGGACCGG ATTTGCTGTT
CTAACTTTTG CCCGATTTGT TAGCTGCGCA CTACTGATCT CACTGCTCGG GAGAGGCTTA
GTTTACCGTA ACTTTGTGGC TGAGCTCGCT ACAACGGCAT TCGCTTTGCC GCTTCTAGCG
CTTTCTCTGC CCATCTTCGG CATATATGCA GCACCTTGGG TCATGTCGTT CGCCTCTTTT
GTTACATGCA TCGTGCTAAT CACGTACAGA ATAGTGCTGG CTCGTGCGCC ATCTGGATTG
TAA
 
Protein sequence
MAVSLAVKMF AGLIFFIIVA RLLSEEQLGF VTFVFACSAF GALLSDLGLG MKILKDVSAE 
PERARLIVLE ALYLKFLALL PAMLVLCVLF IMKDINQAYR LSAISLVVGT LIGSVGDTAL
FALRAANRYA AEAVTVLLCS IVYLLLTLIA GLAEGGIVGI SLSFLASRML YAAVVLLIVR
SSFPSTQGTT NKRSLWIGFR RAFGWAALSN LSYINGQIDN IMIVSLVGLA ENGVYQAGAK
FVASAVSFSS IIVNVGIPKI SALKKEDAHK LKAETGLWLQ TVGVGAIFAS LFFLFGPVIT
KYLVGAKYES VNSLWTGFAV LTFARFVSCA LLISLLGRGL VYRNFVAELA TTAFALPLLA
LSLPIFGIYA APWVMSFASF VTCIVLITYR IVLARAPSGL