| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4211 |
|---|
| Symbol | |
|---|
| ID | 7115338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 4436675 |
|---|
| End bp | 4438354 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643526926 |
|---|
| Product | glucose-methanol-choline oxidoreductase |
|---|
| Protein accession | YP_002422932 |
|---|
| Protein GI | 218532116 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.380149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTCG CCCCCTACGA CTTCATTATC GTCGGCGGAG GGACGGCTGG CTGCGTGCTG
GCCAACCGCC TCTCGGCCGA CGGCCGTCAC CGCGTGCTGA TGCTGGAGGC GGGCCCCCGC
GACCGCTCGC CCTGGATCCA TCTTCCCATC GGCTACGGGA AGACGATGTT CCACAAGACC
CTCAACTGGG GCTTCTACAC CGAGCCCGAG CCGACCATGG GGGATCGGCG CATCTACTGG
CCGCGTGGCC GGACGCTCGG CGGCTCCTCC TCGATTAACG GCCTGATCTA CGTGCGCGGG
CAGCGCGAGG ACTACGACCA CTGGGCTGCG CTCGGCAACG AGGGCTGGTC GTGGCGGGAC
GTGCTGCCGT ATTTCATCCG CTCCGAGCAC AACACCAAGG GCGCAGGGCC CGCCCACGGT
GCCGACGGGC CGCTCTGGTG CTCCGATATC GGGCGGCGGC ACGAGCTGAT CGAGGCGATC
ATCGCGGGCG CGGGCGAACT CAGCGTGCCA CGCACCGACG ACTTCAACAC CGGCGACCAG
GAAGGCGCCG GTTATTACCA GCTCTTCACT CGCAACGGCC GGCGTTGCAG CACCGCGGTC
GCCTACCTGC GCCCGGCCCG CGGGCGCCCG AACCTGCATG TCGAGACCGA TGCGCAAGCC
GCCGGCCTGA TCTTTGAGGG ACGCCGCGTC GTCGGCGTCC GCTACCGGCG GGGCGGCCGG
ATACAGGAGG CGCGCGCGAG CGCGGAGGTG ATCCTCGCCG CCGGCGCGTT GCAGAGCCCG
CAACTGCTGA TGCTGTCGGG CATCGGGCCG GAAGAGGAAC TGGCCCGCCA CGGCATCCCG
GTCGCCCACG CGCTGCCGGG CGTCGGCGCC AACCTTCAGG ACCATCTCCA GATCCGGCTG
ATGTACCGGG TCGCCAAGCC GATCACCACC AACGACGACC TGCGCTCGCT GTGGGGCAAG
GCACGCATCG GCCTACAATG GTTGCTCACC CGCAGCGGAC CGCTCGCCGT CGGGATCAAC
CAGGGCGGCC TGTTCACCCG CGTGATGCCC GGTCCCGGTA CGCCGGACGT GCAGTTCCAC
TTCGCTACAC TCTCGGCCGA CATGGCCGGC GGCGCCCCCC ATCCCTGGTC CGGCTGCACC
TTCTCGGTCT GCCAGCTGCG GCCGGAATCG CGCGGCAGCG TCACGCTGCG CAGCGCCGAC
CCGTTCGCGG CCCCGGTGAT GCGGGCGAAC TACCTCGCGA CCGAGACCGA CCGGCGCTGC
ACCGTCGAGG GCATCAAGTT CGCCCGCCGC CTCGCCGCGA CCGGCCCGTT GCGCGATCTC
CTCACCGAGG AGGTGAAGCC GGGCCCCGGT ACGCAGGGCG ACGCGGCGCT CCTCGCCTTC
GCCCGCGCGT CGGGCGCCAC GATCTTCCAC CCTTCCGGCA CCTGCCGGAT GGGCGCCGAC
CCGCTCGCCG TCACCGACGC GCGCCTGCGC GTCCGCGGCG TCGGTGGGCT GCGCGTCGTC
GATTGCTCGA TCATGCCGAC GCTCGTCTCC GGCAACACCA GCGCGCCCGT GGTGATGATC
GCGGAAAAAG CCTCCGAGAT GATCCTAGAC GACGCGCGGA CCGGATCGAC CCCGGTTCTC
GCCGCCGCGC CGGGATCGGA GACACGCTCC GAGGCGGCGC GCGAGGGGAG CCCGGCATGA
|
|---|
| Protein sequence | MAVAPYDFII VGGGTAGCVL ANRLSADGRH RVLMLEAGPR DRSPWIHLPI GYGKTMFHKT
LNWGFYTEPE PTMGDRRIYW PRGRTLGGSS SINGLIYVRG QREDYDHWAA LGNEGWSWRD
VLPYFIRSEH NTKGAGPAHG ADGPLWCSDI GRRHELIEAI IAGAGELSVP RTDDFNTGDQ
EGAGYYQLFT RNGRRCSTAV AYLRPARGRP NLHVETDAQA AGLIFEGRRV VGVRYRRGGR
IQEARASAEV ILAAGALQSP QLLMLSGIGP EEELARHGIP VAHALPGVGA NLQDHLQIRL
MYRVAKPITT NDDLRSLWGK ARIGLQWLLT RSGPLAVGIN QGGLFTRVMP GPGTPDVQFH
FATLSADMAG GAPHPWSGCT FSVCQLRPES RGSVTLRSAD PFAAPVMRAN YLATETDRRC
TVEGIKFARR LAATGPLRDL LTEEVKPGPG TQGDAALLAF ARASGATIFH PSGTCRMGAD
PLAVTDARLR VRGVGGLRVV DCSIMPTLVS GNTSAPVVMI AEKASEMILD DARTGSTPVL
AAAPGSETRS EAAREGSPA
|
|---|
| |