Gene Mchl_4142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4142 
Symbol 
ID7115267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4368469 
End bp4369479 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content67% 
IMG OID643526856 
Productcytochrome d ubiquinol oxidase, subunit II 
Protein accessionYP_002422864 
Protein GI218532048 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCG ACCTCACGCT GATCTGGGCC GTCCTGATCG CCACCGCCGT GTTCCTCTAC 
GTGGCGATGG ACGGGTTCGA TCTCGGCATC GGCATCCTGT TCCCGGCCAT ATCCGCTAAG
GCCGATCGGG ACGTGATGGT GAACTCCGTC GCCCCCGTGT GGGACGGCAA CGAGACCTGG
CTGATCCTCG GCGGCGGCGG GCTCTTCGCG GTCTTCCCGC TGGCCTACGT GACGATCCTG
CCGGCGCTCT ACATGCCGCT GATCCTGATG CTGCTCGCCC TCGTCTTCCG CGGTGTCGCC
TTCGAAATGC GTTTCCGCAT GGTCACGGCG CGGGGTCAGC TCTGGTGGGA CCGGGCCTTC
TCCTGGGGCA GCTACGTCGC GGCCTTCTGC CAGGGCATCG CGCTCGGCGC CCTCGTCCAG
GGCATCCGCG TCGAGGGGCG GGCCTATGCC GGCGGCTGGT GGGACTGGCT CACCCCCTTC
TCCCTGCTGA CCGGCGTGGC GCTGGTGGTG GGCTACGCGC TCCTGGGCGC ATGCTGGCTC
ATCTGGAAGA CGGGGGGCGA ATTGCAGATC CGCGCTTACC GCCTCGCCCG CCCTCTGGGC
CTGGCGACCT TGGTCCTGAT CGCGATCATC TCGCTCACGA TGCTCGTCCT CAGCGCCCCC
TTCCGCGAGC GCTGGCTCTC CTTCCCCGGC ATTCTCGTCG GGGCGCCGGT GCCCGTGCTC
GTCGGGCTGC TGGCTTTGCG CTTCCAGCGT TCGCTGGAGC GGCGGGAGGA GCTCATGCCC
TTCCTCTGCG CGCTCGGCTT CTTTCTGCTC TCCTATATCG GGCTCGCCAT CAGCTTTTGG
CCGATGATCG TGCCCCCGGA CATCTCGATC TGGGCTGCGG CCACGCATCC GAGCAGCCAA
GCCTTTCTTC TCGCCGGTGC GGTGGTGCTG GTCCCGATGG TGCTCGGCTA CACGGCCTAC
GTCTACTGGC TGTTTCGCGG CAAGGTCACA CCGGAATCCG CGTATCACTG A
 
Protein sequence
MSLDLTLIWA VLIATAVFLY VAMDGFDLGI GILFPAISAK ADRDVMVNSV APVWDGNETW 
LILGGGGLFA VFPLAYVTIL PALYMPLILM LLALVFRGVA FEMRFRMVTA RGQLWWDRAF
SWGSYVAAFC QGIALGALVQ GIRVEGRAYA GGWWDWLTPF SLLTGVALVV GYALLGACWL
IWKTGGELQI RAYRLARPLG LATLVLIAII SLTMLVLSAP FRERWLSFPG ILVGAPVPVL
VGLLALRFQR SLERREELMP FLCALGFFLL SYIGLAISFW PMIVPPDISI WAAATHPSSQ
AFLLAGAVVL VPMVLGYTAY VYWLFRGKVT PESAYH