| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4135 |
|---|
| Symbol | |
|---|
| ID | 7114442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 4356498 |
|---|
| End bp | 4358195 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643526849 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
|---|
| Protein accession | YP_002422857 |
|---|
| Protein GI | 218532041 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTGT TCTTTCGCGG CGATCATGCC GTGTTGCACG CTTTCGGTCG TGCGCATGGC
ATGGTGGAGC TCACGCCGGC TGGCACCGTC TTGAGTGCCA ATGCATGCTA TCTCGACTGG
CTCGGGTATA GCTTCGACGA ATTGCAGGGC CACACACTGG ATGTCGTCCG GGACCCGTAC
GAGGCGACCC GCGCGGAGCA GCAGGAACTC TGGGCAGCGG TGACCCGAGG CGAATCCCGG
ACCGCGTGCT CTCGGCATCT CACCAAGCAG CGCGACGCGA TCTGGCTGCA GGTCAGCTAC
TGCCCGGTGC TCGACCGTAC CGGTCGGGTG AGCAAAATCG TTCTCCTCGC GGTCGATGTC
ACGGCACAGC AGCAGAGCAG CGCCGATCAC GCGGCGGTCC TTGAGGCCAT CAGCTGCTCG
CGCGCCACAA TCGAGTTTGC CCTGGATGGC ACCATCCTCA TGGCCAATAC CGGCTTCCTC
GACGCTGTCG GCTACAAGCT GGAAGAGGTG CAGGGCCGGC ACCACAGCCT GTTTGTCGCT
CCGGCAGAAC GTGAAAGCCA AGCCTATCGC GCGTTCTGGG CGGCTCTGGC GCGCGGCGAG
TTCCAGCGCG CCGAGTACAA GCGCATCGGC AAGGATGGAC GGGAGATTTG GCTGCAGGCC
ATCTACAATC CGGTTCGCGA CAGCCAGGGC AACCCGTACA AGGTCGTGAA GTTCGCGACC
GACATCACTC AGGACAAGCT GCACCGGGCC GACGTGGCAG GGCAGATCGC GGCCATCAAC
CGGTCACAAG GCGTCATCCA TTTCGACATG GATGGTACCA TCCTCGACGC CAACGAGAAC
TTCCTGAGCG TTGTCGGCTA TCGGCTGGAC GAGGTCCGCG GCCAGCACCA TCGGACCTTC
GTCGAGCCGT CTCAGGCCCA GTCGACGGAG TACCTGCAGC TGTGGGAGGC CCTGCGGCGG
GGTGAGTACC GGGCGGGCGT GTTCAAGCGC CTCGGCAAGG GCGGGCGGGC GGTCTGGATC
CAGGCGAGCT ATAACCCGAT CTTCGATGCG GACGGCAAGC CGTTCAAGGT CGTGAAATAC
GCCACCGACA TCACCGCCAA AACGGCGGCT CAGCACGCGG CGACCGGCGC CTCAAGCCAG
ACGCTGATGA ACGTGCAGAC CGTTGCCTCG GCGGCAGAGG AGCTGAGTGC TTCGATCGGT
GACATCGCCC AGAGCCTGGC CCGCTCGCGC TCCGAAGTGG ACGCCATCCA CGATCAGACC
GTCGTGGCGG ACCGCTCCAC AGCGAAGCTG AAGGACGCCG CCGCATCGAT GAACGGCGTC
GTCCAACTCA TCCAGGGCGT TGGTCAGCAG ATCAATCTTC TGGCCCTCAA TGCGACGATC
GAGGCGGCGC GGGCGGGAGA GGCCGGACGC GGTTTTGCTG TGGTGGCCGG CGAGGTGAAG
AACTTGTCGA ACCAAGTGAC CCAGGCAACG ACGCGGATTG CACAGGACAT CCATGGGATG
CAGGGAATCG CGGAAGACGC GGTGGGTGCC CTGCTCTCGA TCGTGCAGGC GATCGGGTCG
GTACGGGAGA CGGTGACCGG CATCGCCTCG GCCGTCGATG AGCAGAACGC CATCACCCAG
GAGATCTCGT CCAGCATGCA GACGGCCGCA CACGGTGTCG GCGAGATCAA CACCAGTTTG
CAGGCTCTCA CGGGCTGA
|
|---|
| Protein sequence | MSLFFRGDHA VLHAFGRAHG MVELTPAGTV LSANACYLDW LGYSFDELQG HTLDVVRDPY
EATRAEQQEL WAAVTRGESR TACSRHLTKQ RDAIWLQVSY CPVLDRTGRV SKIVLLAVDV
TAQQQSSADH AAVLEAISCS RATIEFALDG TILMANTGFL DAVGYKLEEV QGRHHSLFVA
PAERESQAYR AFWAALARGE FQRAEYKRIG KDGREIWLQA IYNPVRDSQG NPYKVVKFAT
DITQDKLHRA DVAGQIAAIN RSQGVIHFDM DGTILDANEN FLSVVGYRLD EVRGQHHRTF
VEPSQAQSTE YLQLWEALRR GEYRAGVFKR LGKGGRAVWI QASYNPIFDA DGKPFKVVKY
ATDITAKTAA QHAATGASSQ TLMNVQTVAS AAEELSASIG DIAQSLARSR SEVDAIHDQT
VVADRSTAKL KDAAASMNGV VQLIQGVGQQ INLLALNATI EAARAGEAGR GFAVVAGEVK
NLSNQVTQAT TRIAQDIHGM QGIAEDAVGA LLSIVQAIGS VRETVTGIAS AVDEQNAITQ
EISSSMQTAA HGVGEINTSL QALTG
|
|---|
| |