Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_4112 |
Symbol | |
ID | 7114419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 4334529 |
End bp | 4336250 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643526829 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_002422837 |
Protein GI | 218532021 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCGAC GGGGACAATA CGAAGACACG TGGTTCACGT TCTCGTACTC ACCAGTGCGC GAGGAAGATG GCCGCGTAGC AGGCATGTTC TGCTGCTGTG TGGAAACGAC AGCAGGAGTT CGGTCACAAG CCGAACTCGC TGAGCTGAAC ATCGACCTTG AACGGCAGGT GACTGAACGA TCCCGTGAGC GGGATCGGCT CTGGCGTAAC ACCCAAGACA TTCAGGTCAT CATTGACGGT GCGGGCGTCT TTCACGCCGT CAATCCAGCT TTCACGGCGA TCCTCGGCTG GACACCTGAA GATGTGATTG GCAGGCCGGT GTTCGACTTT GTACTTCCAG ATGATGAGGC GTTGACCAGC CGCGCGTTAG AGCATGCGCG CGTCGAGAGC CTGCCGGTCG TTGAGAACCG CTACCGCCAC AAGAACGGGG GTTTCCGCTG GATCTCGTGG GTCGCTGCTC CTGAGGCGAA GCTGATCTAC GCGAGTGGAC GGCACATCAC GGCGGAGAAG GAGCAGGCCG AGGCTCTGAG CAGGACCGAG GAGGCCCTTC GCCAAGCGCA GAAGATGGAG GCTGTTGGGC AACTCACCGG AGGGCTGGCC CACGACTTCA ACAACCTGCT GGCGGGCATC TCCGGCTCAC TGGAACTGAT GCAGACCCGC ATGCTACAGG GCCGCCTCAC GGATGTGGAC CGCTACATGA CGGCCGCGCA GGGGGCAGCA AAGCGCGCCG CTGCGCTGAC CCATCGGCTG CTCGCGTTCT CCCGTCGCCA GACCCTCGAC CCGAAGCCCA CCGATGTCAG CCGGCTTGCC ATGGGCATGC ACGAGCTGAT CCAGCGTACG GTCGGACCCG GCATCCTGGT CGAGGTCGTG GGCGCGACCG GTGCTTGGCC GGCCTTGGTG GACCCGCCGC AGCTTGAGAA CGCCCTTCTG AACCTCTGCA TCAACGCCCG CGACGCGATG CCGGATGGCG GCATCATCAC CATCGAGACC GCGAATAAGT GGATGGACGA ACGCGCAGCC CGCCAGCACG ATATGCCGGA AGGCCAGTAC CTCAGCCTCG CCGTGACCGA TACCGGGACC GGCATGCCGC CGGGGGTCGT CGCCAGGGCA TTCGACCCGT TCTTCACGAC GAAGCCTATC GGTGAGGGCA CGGGGCTGGG CCTGTCGATG ATCTACGGGT TCGCGCAGCA GTCAGGCGGG CAGGTCCGCA TCTACTCGGA AGTCGGGCAG GGCACCACCG TATGCATCTA CCTGCCGCGC TACTACGGGG TTGTTGAAGA TGACACCGCA GGCGAGCAGA TTGCCGAACT ACCACGCTCG GAGGCTGGCG AGACGGTCCT GATTGTGGAC GACGAGCCGA CCGTGCGCAT GCTGATCACC GACATCCTCG AAGACCTTGG CTATGCGGCC ATTGAGGCGG GTGACAGCGC GACCGGCCTC AAGGTGCTGC AATCGGACGT ACGCATCGAC CTGCTGGTGA CGGACGTAGG CCTGCCCGGC GGCATGAACG GGCGACAGAT GGCGGACGCG GCGCGGAACC ATCGACCCGA CCTGAAGGTG CTGTTCATCA CCGGCTACGC GGAGAACGCG ATCCTCGGCA ACGGGACGCT TCCACCGGGG ATGGCAGTGC TGACCAAGCC GTTCGCGATG GACAACATGG CCGCGCGCAT CCGCTCGATG ATCGAGGCGG GGCGGGAGAC GAGGCTGCAA CGTCGAAGCT GA
|
Protein sequence | MMRRGQYEDT WFTFSYSPVR EEDGRVAGMF CCCVETTAGV RSQAELAELN IDLERQVTER SRERDRLWRN TQDIQVIIDG AGVFHAVNPA FTAILGWTPE DVIGRPVFDF VLPDDEALTS RALEHARVES LPVVENRYRH KNGGFRWISW VAAPEAKLIY ASGRHITAEK EQAEALSRTE EALRQAQKME AVGQLTGGLA HDFNNLLAGI SGSLELMQTR MLQGRLTDVD RYMTAAQGAA KRAAALTHRL LAFSRRQTLD PKPTDVSRLA MGMHELIQRT VGPGILVEVV GATGAWPALV DPPQLENALL NLCINARDAM PDGGIITIET ANKWMDERAA RQHDMPEGQY LSLAVTDTGT GMPPGVVARA FDPFFTTKPI GEGTGLGLSM IYGFAQQSGG QVRIYSEVGQ GTTVCIYLPR YYGVVEDDTA GEQIAELPRS EAGETVLIVD DEPTVRMLIT DILEDLGYAA IEAGDSATGL KVLQSDVRID LLVTDVGLPG GMNGRQMADA ARNHRPDLKV LFITGYAENA ILGNGTLPPG MAVLTKPFAM DNMAARIRSM IEAGRETRLQ RRS
|
| |